Ruditapes philippinarum (Manila clam): 132723833
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Entry
132723833 CDS
T09557
Name
(RefSeq) homeobox protein Nkx-2.2a-like isoform X1
KO
K08029
homeobox protein Nkx-2.2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132723833
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
132723833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Vfa1
CDC45
Homeobox_KN
DUF6594
FAM176
PBP1_TM
NOA36
CBP110
Motif
Other DBs
NCBI-GeneID:
132723833
NCBI-ProteinID:
XP_060564607
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MMSESPLKSTTDAIAEAWSAMDGSLVMKSSSFNVKDILDLPREGKLACSPVATGTTTTGS
LRTIPNIPDIPPVDYSYDAAENPYTRWLQNNASDVMQYTHLPQMNSPSSSSNQSSGEIAH
ETNGGHVRLKSEHNESSDAEADDIDKDDDEEDDEDDDEKKDQNSSESNQKKRKRRVLFSK
AQTYELERRFRQQRYLSAPEREHLASIIRLTPVQVKIWFQNHRYKLKRARQEKGLDLNPL
PSPRRVAVPVLVRDGKPCQPSMNGGLIKSADHHHHNLQANLSNMSHMSHTGMGSMNNVNS
MNTLPSMGDSLPGMNSLNTSLSSPMNMSCAYNMNSAMNSMNGMNMPNMNTYTNNMNVLPS
YSHPLMQPQTRWW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagaaagtccgctaaaatcaacgacagacgcaattgcagaggcatggtcagcg
atggacggcagtctagtgatgaaatcaagcagtttcaatgtaaaggatattctggaccta
ccgagggaaggtaaactggcatgcagtcctgtggctacagggacgactaccacgggttca
cttagaactattccaaatattccagatattccacctgtagactacagctatgatgcagcc
gaaaatccgtacacccgatggttacagaataacgcttccgatgtcatgcaatatacacac
ttaccacagatgaactcgccaagcagtagttcaaaccagtcgtctggtgaaatagcgcac
gagacaaatggcgggcacgtaagactgaaatcagaacataacgagtcttcggacgctgaa
gcagacgacatcgacaaagatgacgacgaagaggatgacgaagatgacgatgaaaagaaa
gatcaaaatagttcagaaagtaatcagaaaaagaggaaacgacgcgtattattctcaaag
gctcaaacttacgagcttgaaaggcggtttagacagcagcggtatttatctgcgccggag
agagaacatttagcaagcatcatcaggcttacccccgtgcaagttaaaatatggtttcaa
aatcacagatataaattaaaacgtgctagacaagagaagggacttgatctcaatccatta
ccttcccctcggagagttgcagttcctgtgttagtaagggacggtaaaccgtgccaacct
agtatgaacggtggccttatcaagtcagcagatcatcatcatcataatctacaggcgaat
ctcagcaatatgtcacacatgagccatactggaatgggctccatgaacaatgtgaacagc
atgaacactttaccgtccatgggagatagtctcccgggtatgaactcattaaatacgtca
ttgtcatcacctatgaacatgagctgtgcatataatatgaactcggcaatgaattctatg
aatgggatgaatatgccaaatatgaacacatatactaacaatatgaatgtattacctagt
tatagccaccctttaatgcagccgcaaacacgttggtggtag
DBGET
integrated database retrieval system
