Ruditapes philippinarum (Manila clam): 132724004
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Entry
132724004 CDS
T09557
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132724004
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
132724004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
132724004
NCBI-ProteinID:
XP_060564800
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MSSRMCNQCGCTDIDIDSTRGDAVCTGCGSVLEDQIIVSEVQFQENSGGGSSLIGQFVSS
EGPGKSFSIGGSFPHGMQKESRTVTLQNGKKRIQQLASQMNLNQHCIDTAFNFFKMAVSK
RMTRGRKTSNVIAACLYLVCRSERTPHMLLDFSDALQVNVYSLGRTYLHLSRELCINLPD
IDPALYISRFAHNLEFGEKTHEVSMTAMRLVQRMKRDWMSTGRRPSGLCGAALLVAARIH
DFSRSIKEIIKVVKVCQSTLRKRLVEFEETPSSQLTIEEFQTIDLEQEADPPSFTEGKRR
AKKIQEQSKLPEYASEVSKLQEEIEQTLLNQKPRGIWAHYAKMADDCGSVDSEASRLSDL
TESEESINEAKRNSSLDSLSDLSTGKNEIIKSESPQEPKTENSTQEVFDSGGPKLENSTQ
EVFDSGGTKNSETDDLQSDDLVETSKLTADTIGNELVIGSDLNVLDDKNVKEVTGALGVP
AIGTEMETLVSDCMKEGSENSRDSVVDEELDLTGIDDAEINKYLLADKEVLLKTRIWMAE
NAEFLEEMRLKEEKKAKEAEEEAKKPPEKRKKYTKRKRKAPMQEAATAQEAIQKIMQEKK
ISCKINYDVLNDLNVKSTLTTNSPVKGENSVLGSAQDNSALISRFRKPSVSLDFRPAETK
PVVKKAKKADLAPPPMLPQMDEKSKVDVVVESGPVQYDQKDDVYDEEEAEDYFEEEEHHL
SAARLFGNTGVEVEEYDYDMD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcgtatgtgcaaccagtgtggttgcactgacattgatatagactcaacaaga
ggggatgcagtatgtacaggctgtggttccgttctggaagatcagatcatcgtgtcagag
gtccagttccaggaaaactctggcggtggttcatcattgattggacagtttgtatcttca
gaaggaccaggtaaatcattctccattggaggaagttttccacatggaatgcaaaaagaa
tcaaggacagtaactcttcagaatggcaagaaaagaatacaacagctagccagtcaaatg
aatctgaatcagcactgtattgatactgcatttaatttctttaaaatggcagtgtcgaaa
cgtatgacacggggtcgtaaaacatcaaacgtgatagcggcctgtttgtatctggtttgt
cgatcagaaagaacacctcatatgctactagacttcagtgatgcattacaggtgaatgtc
tacagtttaggaaggacgtatcttcatctgtctagagaactatgtatcaacttgccagat
attgatccagcattgtacatatcgaggtttgcccataatctagagtttggagagaagact
catgaagtatccatgactgctatgagacttgtacagcggatgaagcgtgactggatgtcc
actggtagacgacccagtggtctctgcggcgcagcattgttagtggctgccagaattcat
gatttctcccggtctattaaggagattataaaggtggtgaaagtatgtcagtcaacatta
aggaaaagattggttgagtttgaagagacaccttcaagtcagttgacaattgaagaattc
cagactatagatttagaacaagaagcagatccaccatcatttactgagggaaaacgtaga
gcaaaaaagatacaggaacaaagcaagctgccagagtatgcatcagaagtttccaagctt
caggaggagatagagcaaacattacttaatcaaaaaccaagaggaatatgggcacattat
gctaaaatggcagatgattgtggctctgtggactcggaagcatctcgactgagtgacctc
acagaatctgaagagagcattaatgaagccaagagaaactctagcctagactctctctca
gatctaagtactggtaaaaatgaaataattaaatcagaatctcctcaagaacctaaaaca
gaaaactccactcaagaagtgtttgatagtggagggccaaaattagaaaactccactcaa
gaggtgtttgatagtggagggacaaaaaacagtgaaacagatgatttacaatctgatgat
ctcgtagaaacaagtaaattaacagcagatactattggtaatgagttagttattggaagt
gatttaaatgtactcgatgataagaatgtgaaggaggtaactggagctctaggtgtgcca
gctataggaacagagatggagacactagtcagtgattgtatgaaggaaggaagtgaaaat
tctagggatagtgttgtggatgaggaacttgatctaactggtattgatgatgctgagatt
aataagtacttattggcagacaaagaggtattactgaaaactaggatctggatggcagaa
aatgctgaattccttgaagaaatgagattaaaagaagaaaagaaagcaaaagaggctgaa
gaagaagctaagaaaccaccagaaaaaagaaaaaaatatactaagaggaagaggaaagca
ccaatgcaagaggcagccactgctcaagaggcaatacagaaaattatgcaagagaagaaa
atatcgtgtaaaattaactatgatgtattgaacgatttaaatgttaagtctacattaact
acaaacagtccagtgaagggagagaacagtgttttaggtagtgcacaagataacagtgct
ctgatatcgagatttagaaaaccaagtgtcagtttggattttagaccagcagagacaaaa
ccagttgtaaagaaggcaaagaaggcagatcttgccccaccacccatgctacctcaaatg
gatgagaaatccaaggttgatgttgttgtagaatcgggaccagtgcaatatgaccagaaa
gatgatgtatatgatgaagaggaggcagaagattactttgaggaagaagaacatcatctt
agtgcagcacgcttgtttggaaatacaggtgtggaggtagaggagtatgattatgacatg
gactga
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