Ruditapes philippinarum (Manila clam): 132724089 Help Entry 132724089         CDS       T09557                                  Name (RefSeq) toll-like receptor 4 isoform X1   KO K18808   toll-like receptor 13 Organism rphi  Ruditapes philippinarum (Manila clam) Brite KEGG Orthology (KO) [BR:rphi00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:rphi04054]     132724089 Pattern recognition receptors [BR:rphi04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    132724089 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_8 LRR_4 TIR_2 TIR LRR_6 LRR_14 LRR_1 LRR_NXF1-5 LRR_9 LRRNT LRR_EndoS Motif Other DBs NCBI-GeneID:  132724089 NCBI-ProteinID:  XP_060564886 LinkDB All DBs Position Unknown AA seq 812 aa AA seqDB search MRYITLFLCLAVVIWYPENSLAQRVNGVCTVNGTVADCSHSKLTNIPSSLPANITCLNML GNSLSNITGRPWQRYKHLKKLSLARNRITALHKGNFDGLQKLEMLDLSLNLIRYTSIHKD VFKPLRSLVFLDIKQNLSGISVSEYYPEGLKNLIHLKTLVIDGLGTQALPHLPNLIELYM SGEYGRCYIPHINGNFFENITTVQNIFLSNCSIKKVDFNSFMALHNITSLDMSDNINLGM ESLPNITSGLARKQRLKRLNLNDLYDHSQFDFCSSLNYDDVKYLSNSSIEMVTIENNNIV RMDVKSVEHWPKSIKYISIQHNMFLYGNYTPFLILTDVLNRTVYLDASRMAAANRPIYSS EDAMKMVLLKSNMQQHGTESVCRLMFTRYQVGDYFQFIENRLKQNDINTDTSKNLEPKLE YLDLSENLPVLIERIFEIFPHIPNLKVLNVSRNYLGYPLYDGPSIIGQLKHLRTLDLSDN KIIRLSPNIFNNLTKLEKLYLSHNKISNITFDLSHSKNLHYIDLGYNNLESINQATRDTL DNISKNHKLNHVHVNIANNSLKCTCENLLFYSWVKKNTTYIVNKDNTNCTFKNSTSVSLS TLIKNYDHFERECSNYLVIILVTSIAFIFIIVIITSALMYRFRWNLRYMYYMTKLKLLAN YQRLNDTEYEKEVFVSYADEDRRFVAEKVRLELEERGEISLLIHDRDFRAGAFVQDNILR AISCTRRTLVILTKQFLKSKWCMYEFNMARMEAADTGRNVLCFILKEDIPTTELPVEMID ALKKITYIEYPTADDDLSQFWDRLRATLKHET NT seq 2439 nt NT seq  +upstreamnt  +downstreamnt atgcggtacattacattatttctgtgtttggcagtagttatatggtaccctgagaactca cttgcgcagcgtgttaatggcgtatgtacagtaaacggaactgttgctgattgcagtcat tcaaagcttacaaatatcccaagttctctgccagcaaacataacttgtttaaatatgctt ggtaacagtttatcgaatatcaccggaagaccatggcaaagatataagcatttaaagaaa ctgtcgctcgctagaaacagaataactgcactacataaagggaattttgatggccttcaa aagttagagatgcttgatttaagtttaaacttaattcgatacacaagcattcataaggat gtttttaaaccgctacggtcacttgtctttttagatattaagcagaatttgtctggtatt tcggtaagtgaatactatcctgaaggactgaagaatcttattcatctcaaaactttggtt attgatggacttggtacacaagcgttgcctcatttaccgaatttgatcgaactatacatg tcgggggaatatggaagatgttatattcctcatatcaatggaaacttttttgaaaatata acgactgttcaaaacatatttctgtcaaattgctcaatcaaaaaggttgatttcaacagt tttatggcattgcataatattacttctcttgatatgtcagataatataaatcttggcatg gaatctttaccaaacatcacaagcggacttgcaaggaaacagagacttaagcgtttgaac ttgaatgacctctacgaccattctcaatttgatttctgttcttcgctcaattatgatgat gttaaatatttatcgaattcttctatagaaatggtaacaattgaaaacaacaatattgtc cgcatggatgtcaagtcagtggaacattggcccaaatctatcaaatatatctctattcag cacaatatgttcctttatggtaactacacaccatttttgattttaaccgatgtattgaat agaacagtgtaccttgatgcaagtcgtatggcagcagctaatcgtcctatttatagtagt gaggatgctatgaaaatggtgttactaaaatctaacatgcaacaacatggtaccgaatct gtatgcaggttaatgtttactcgatatcaagttggagattattttcaatttattgaaaat agactaaaacaaaatgatattaacacggatacatctaaaaaccttgaacctaaacttgaa tatcttgatttatctgaaaatcttccggtattgatagaaaggatattcgaaatatttcct cacattccgaatttgaaagtcctaaatgtgtctagaaattacctcggttatccactttac gatgggcctagcataattggacaactgaagcatctacgcactttagatctaagtgacaat aaaattatacgcttatcgccgaatatattcaataatcttacaaaacttgaaaaattatat ttgtcacacaataaaattagcaatattacgtttgatttaagccattctaaaaacttacat tatattgatcttgggtacaataatctagaatcaatcaatcaagcaacgagagacactctc gataatatttcaaaaaatcacaaattgaatcatgtacatgttaacatagcgaataacagt ttgaaatgcacttgtgaaaatttattgttttatagttgggtaaaaaaaaatacaacatat attgtaaacaaagataacacgaattgtacatttaaaaattctacatcagtgtcactatca acacttataaaaaattatgatcactttgaacgagagtgttcaaattatctagtaattatt ctggttacaagtattgcttttatttttataatagtcatcataacaagtgcgttgatgtac aggtttcgctggaatcttcggtacatgtattacatgacaaaattaaaattgttggctaac tatcaacggcttaatgatacagaatacgagaaagaagtgttcgtgtcatacgcggatgaa gacagaagattcgtcgcagagaaggttcggcttgagttggaggaaaggggtgaaatatct ttgttgattcatgacagagatttccgagcaggtgcgttcgtgcaggataacatattgcga gcaatatcatgcacaaggagaacacttgttattcttacgaaacaatttttaaaaagtaaa tggtgtatgtatgaatttaatatggcacgtatggaagcagcagacactggaagaaatgtt ttatgttttatacttaaagaggatattcccacaactgaattaccagtggaaatgatagat gctttaaagaagattacatacatagagtatccgactgcagacgacgacttgtcgcagttt tgggacagattgagggctacattaaaacacgaaacttaa

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