Ruditapes philippinarum (Manila clam): 132724154
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Entry
132724154 CDS
T09557
Name
(RefSeq) NSFL1 cofactor p47-like
KO
K14012
UBX domain-containing protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132724154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132724154
Membrane trafficking [BR:
rphi04131
]
SNARE
SNARE associated proteins
Others
132724154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEP
UBX
UBA_4
UBA_8
Spt20_SEP
UBA_OTUD7A_B
TAP_C
Motif
Other DBs
NCBI-GeneID:
132724154
NCBI-ProteinID:
XP_060564960
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MADKAKQDMIDNFIKITAVDQDRARFYLESSAWNLELAMGSFYEGDPDDDDDLVGGVVGS
AMPQQPPAMAPQEPETGSRKSKTTGTSSSRFATIGSMQGQGEDSSEEEGQAFYAGGSERS
GQQVLGPKKKKTNVVEDLFKSAREHGAEEVNSAEPPRPGGSRAFKGSGYRLGDGEGQDSE
EISGEPVAKSRRQVDCVLKLWKNGFSVDDGPLRDFKDPANKEFLASISKGEVPHELIQEA
RGGEVNLNMEDHRTEDYVKPKVPTKAFTGEGNVLGSPAPTVVSASSKSSSKAPSSNQSTL
KVDESKPVTTIQIRLADGSRLVSKFNHSHTVRDIRQHITSSRPQYEGANFILQTTFPNRE
LTNTSETIEQAKLQNAVVVQRLT
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaagcaaaacaagacatgattgataattttatcaagatcactgctgttgat
caagatagagcgcgtttttatttagaatcatctgcctggaatcttgaattagccatggga
agtttctatgaaggtgatccagatgatgatgatgatctagttggtggtgttgtcggctca
gctatgcctcaacaaccaccagccatggcaccgcaggaacctgagactggcagtcgtaaa
tccaagacaacaggaacctcaagctcaaggtttgctacaataggaagtatgcaaggtcaa
ggtgaagattcaagtgaggaagaaggtcaagctttctatgctggtggatctgagagaagt
ggacagcaagttttaggacctaaaaagaagaagacaaatgttgtggaagatcttttcaag
tctgccagggaacatggtgctgaggaagtgaacagtgctgagccaccaaggccgggaggc
agtagggcctttaagggctctggttaccggctcggggatggtgaaggacaggattctgaa
gaaatctctggggaaccagtagcaaaaagtagaagacaggttgactgtgtgttaaaacta
tggaagaacgggttcagtgtagatgacggacctctaagagattttaaagatccagctaat
aaagaattcctagcctccatatcaaaaggagaagttccacatgagttaattcaagaagcg
agaggtggggaagttaatttaaatatggaagatcatcgaacagaagattatgtgaagcca
aaagttccgacaaaagcttttacaggggaagggaatgttcttggaagtccagctccgact
gtggttagtgcttcatctaaaagttccagtaaagctcctagttcaaaccagtcaacgttg
aaggtagatgagtcaaaaccagtcaccacgatacaaatacgtctagccgatggatcaaga
ttggtatcgaagttcaatcactcacatacagtcagagatatacggcaacatatcacctca
tcccgtccacagtatgaaggtgcgaacttcatactacaaacaacgtttccaaaccgtgag
cttaccaatacttcagagactatagaacaagctaaactccagaatgccgtcgtagtacag
aggttaacgtga
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