Ruditapes philippinarum (Manila clam): 132724214
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Entry
132724214 CDS
T09557
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rphi01100
Metabolic pathways
Module
rphi_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
132724214
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132724214
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
132724214
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
132724214
Glycosyltransferases [BR:
rphi01003
]
Glycan extension
O-Glycan
132724214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Galactosyl_T
Glyco_transf_21
Motif
Other DBs
NCBI-GeneID:
132724214
NCBI-ProteinID:
XP_060565018
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MARTRLDRNLNFVAGTIFGLCVGLVLSTWCRNKLLPCMPTFSRSGCCSGALDFIENGNFN
GDNQNKESPNSVYIEEADEKGFIFIGIMTAKKYLDSRVVAAYRTWAQSVNGEVMFFSSEN
SESSYDVPVVSLKNVDDSYPPQKKSFAMLKYMSEHYLDKYEWFMRADDDIFIKGDKLEQF
LRSINSSKPQYIGQAGVGTKEEIGLLNLGSTDNYCMGGTGMVFSHETLRLLKPHLKFCVG
NLYSTHEDVEIGRCVRKAAGIPCTWAFEMQKYFYQNFKEYKGSFVDTLLDKEVQRAITLH
PIKMPTYQYRINNHFTSVKIKEMKQKELELHREITEMNQVLNAKYDFDKYGLKPSVTTFI
PQKPSDVIGWEFINSKVVTSHLNVNPRKGLTAYRKETLNEVVAQTMEIINKNSKHRGRTI
DYKDVLYGYTNTDPLNGANYILDILLTYRKHKGKNLNVPVRRHAYLHQTFLKTEFIESPW
TSEQDNKVTADSPHIFQQLRGSEKNLEKNKLKETVHLILPLAGKVKEFDRFMKIFEEICL
AKKDNAQMHIVLFTENSSAKEVEDILNIVGKYQRKYGGHLLEVIETEGDFARAKALDLGA
KQCSVDDLIFCVDVDIVLTQDAINRIRLNTIQGVQVYYPIVFSQYDPSVLCGNQSNCKIE
MFDFDHRMGYWRQFGFGIAAMYRSDLERVGGYDTGIQGWGKEDVDLFDKVVQSNLTIFRA
VDTGMIHAFHPIKCDVNLEPSQFQMCIGSKATCLASQNQLAQMTLKIDKILNRNLDVKV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcacggacaagacttgatcgaaacttaaattttgtagctgggacaatatttggcttg
tgtgtaggactggttttgtcaacttggtgtcgaaacaagttactaccatgtatgccgact
ttctcaagatccgggtgctgcagtggagctttggacttcatcgaaaatggtaatttcaat
ggcgataatcaaaataaagaatctccaaatagtgtttatatcgaagaagcagatgaaaaa
ggttttatattcataggaatcatgactgctaaaaaatacttagattcgcgtgttgtggct
gcatacagaacttgggcacaaagtgtaaatggtgaagtaatgtttttctctagtgaaaac
tcagaatcttcatatgacgtgccagttgttagtttgaaaaatgttgatgattcttatcca
ccacagaaaaaatcatttgctatgttaaagtatatgagtgaacattatcttgataaatat
gaatggtttatgagagctgatgatgatatatttatcaaaggtgacaagttagaacagttt
ttaaggtcaattaacagctccaagccacaatacatcggacaagctggagttggaactaag
gaagagatagggttgctcaatctagggagcactgacaattattgtatgggaggcacaggg
atggtttttagtcatgaaactttaagattactgaaacctcatctgaaattttgtgttgga
aacctctacagtacacacgaagatgttgagattggacgttgtgtcagaaaagcagcaggg
attccatgtacatgggcttttgagatgcagaaatacttctaccagaacttcaaggagtac
aaaggttcatttgtggacacattattagacaaggaagttcaaagggcaataactcttcat
ccaatcaagatgcccacctaccagtacagaatcaacaatcatttcacatccgtaaaaatc
aaagaaatgaagcaaaaggagcttgaacttcatagagagataactgagatgaatcaagtt
ctaaatgccaagtatgactttgataaatatggtctcaagccttcggtcaccacttttata
ccacagaaacctagcgatgtgattggatgggaatttatcaactctaaagtagttacttcc
cacctaaatgtcaacccaagaaaaggtttgacagcttaccgaaaggaaacactaaatgaa
gtagttgctcaaacaatggaaataataaacaagaattccaaacaccggggacgaactatt
gactataaggatgttttatatggttatactaatacagatcccctaaatggtgcaaattat
attctagatattttgcttacttatagaaaacacaaaggaaagaatttgaatgtccctgta
aggcgacatgcatacttacaccagactttcttgaaaacagaatttattgaaagtccatgg
acttcggaacaagataataaagtgactgcagattctcctcacatattccagcagctgaga
gggagtgagaaaaatttggagaaaaataaattgaaagaaactgtacatttgattttacct
ttggcgggtaaagttaaagaatttgaccggtttatgaaaatatttgaagaaatctgttta
gctaagaaagataatgctcaaatgcatattgtattatttacagagaatagttcagctaaa
gaagttgaagatattttaaatattgtcggcaagtatcaaagaaaatatggcggtcatctc
ttagaggttatagagacggaaggtgattttgctcgagcaaaagctctagaccttggtgca
aaacagtgttcagttgatgatttgatattttgtgttgatgtagatatagtgttgactcaa
gatgccataaatcgtatacgactgaacactatacaaggtgtgcaagtgtactaccctata
gtttttagccaatacgatccaagtgttttatgtggtaaccaatcaaattgtaagatagaa
atgttcgacttcgaccatcgaatgggttattggcgacaatttggattcgggatagctgca
atgtataggagtgaccttgagcgcgtagggggctatgacacaggcatacaagggtgggga
aaggaagatgttgacttgtttgacaaggttgttcaaagcaatcttacaatattccgtgca
gtagacactggtatgatacatgcattccatccgataaaatgtgatgttaacttagaacct
tcgcaattccaaatgtgtatagggtccaaagctacatgtctcgcgtcgcaaaatcaactt
gcgcaaatgactctaaaaatagacaagatactcaacagaaatttagatgtaaaagtctga
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