Ruditapes philippinarum (Manila clam): 132724306
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Entry
132724306 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: lethal(3)malignant brain tumor-like protein 3
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132724306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132724306
03036 Chromosome and associated proteins [BR:
rphi03036
]
132724306
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
132724306
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
132724306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
zf-FCS_1
Peptidase_C92
Motif
Other DBs
NCBI-GeneID:
132724306
NCBI-ProteinID:
XP_060565129
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MNPQQDSGEPPSKKQRSDSADDPLVKHDPVAMATTALTLQTVPSTLPTVDLNDPLGKGKA
LPRATVAITTGNVRPSLQSHTQAVTSDIVMKTQPVQSARISITNPQFITTQQYIPIQQTS
DGTFTFQLTPGSYGSQPKSPVTPPTSMTLTSAGAPRYPSPQIITLPSRTTVANTTSAKPV
KPTLTVVDARNQQPVQRVIQSDGGKPVEPVKLGPGQTQISFQVPLNWNTQGSKSLLDNSK
TVSLVPLNPSEPNSRSLLQGNETMTSQSGVANITVPKVTLSGVPNTAPKTYITGNKVFGN
LGTGQVITQTTTGLIAVTKPGQTASIARIPKGSFMISNKQYTIVPSSTAPVVTQLVKTEK
LSKGKVTMAEAQIMLPTGPAKISWPLQTQTCSSDSKHILITTPGQALAGKTAIPKTHLVV
TTSDSNIKVSNISPAVPTAKVVEVGSPNKVAMATGIQAVGQKMNAPTTKTSIIPAQKNWE
LVKQSSQLLPGNSSKSPSPVVGNKNGSKVEDKVHKDTVTDVKQANDKHVKTDVETKGKTM
ENKEKNVNKGRNEMDNSGLSKKQVSRSDSSNGIESKEFKEGIETTQNDNSNDSVEIKLEN
VKDNSEKMDVDDVNMESVKEEADQGERKDKKEDFNPMDAMIWNNGIGELPGSNLKFHLND
LGILEVLNDDLECNETLNTSDELDHIETTNDTEKEPKQEKKTEKLEPGSKQGKMLRTSKE
VSNKDEISQCENCAEYGFTTDFYKDGRFCSQTCIRAFESKHMREVKKQGTMSKMILNMKK
GKKKLLLKDGVPKDRDVKADPPTPGKKSKAFVWTRYLEQEKAVEAPARLFKNPFPSVKNN
FRIGMKLEGVDPMHQSKFCVLSVAEVSGYRVRLHFDGYSECFDFWLDIDSPFIFPVGFCE
KLGKTLQPPKGFSVDEFSWTSYLKLTKGVPAPKSLFSNQPVQSVTPNLFRVGSKLEAVDK
KNSSLICVASVADTLGDKVLIHFDSWEDNYDYWCDMTSPFIHPIGYCEETELVLSPPLDW
KDVTLFSWEKFLNKTKSQQVPARAFKPVSDRGLPPPVKLEIVEKQTPLVRVXTIEEVENY
MVKIHFDGWSDIYDYWLEDDSPDLHPPGWCAKTGHPLVPPITPSDLVVTTGPGVCPTPGC
KGIGHIKGPKYSGHHSTFGCPYSDINMNKESVLGDRLNSVAIRPEDTVSRHYDEHRTSPD
SKKHTDSGQHGDIPKKLGRGRKPKSYYVALEEQKVAREKERLEKEETLRQGIHNSVFSSS
MISTPKPDVPLCWEQHCKLLPGVTSIRGNDVNKWTIDQVAAFINTLPGCEEQAKLFKEEQ
IDGEAFLLLTQSDIVKIMNIKLGPALKIFNSIVMFKNSIEV
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacaacaggatagtggagagcctcctagcaagaaacaaaggtcagacagtgca
gatgatccactggtgaaacatgacccagttgccatggcaacaactgcactgactttacaa
acagttccaagtactctaccaacagtagacttaaatgacccactaggaaaaggaaaagcg
ttaccaagagcaactgttgctataacaacaggaaatgttagacccagtcttcagtcacat
acacaggctgtgacaagtgacatagttatgaagacacaacctgttcaaagtgcccgaata
tccattaccaatccccagtttataaccactcaacaatatattccaatacagcagacatca
gatggtacatttacgtttcagcttactccaggttcttatggtagccagccaaagtctcca
gtcacccctccaacaagtatgaccttgacctctgctggggcaccaagatatccttcccct
cagatcattacactccctagcagaacaactgttgcaaatactacaagtgcaaaaccagtc
aagcccactttgacagtagtggatgccaggaaccagcaaccagtccaaagggtgatacag
tctgatggtggtaaaccagtggaaccagtcaaattagggcctgggcaaacacagataagt
ttccaagttccacttaattggaatacacaaggatctaaatctttactagacaattcaaaa
actgtatcattagtgccattaaacccttcagaaccaaactcacgttcattgttgcaaggg
aatgagacaatgacgtcacagagtggtgttgcaaatataactgttccaaaagttactctc
tctggggtgcctaatacagcacctaaaacatacattactggaaataaagtttttggaaat
ttaggcactggtcaagtgattacacaaacaacaactggattaatagcagttacaaaacct
ggtcaaacagcatccatcgcccgaattccaaaaggttctttcatgatcagcaacaaacag
tatacaatagttccatcaagtactgcccctgttgtaacccaacttgtgaaaactgaaaaa
ttaagtaaaggtaaagtcaccatggctgaagctcagataatgttacccactggaccagct
aagatttcatggccattacagacgcaaacttgctcttctgacagtaaacacatcttgata
acaactcctggacaagcattggctggaaaaacagcaattcctaaaactcatttggttgtc
acaacaagtgattctaatatcaaagtctccaacatttcaccagcagtcccaacagctaaa
gttgtagaagttggatcacctaataaagttgccatggcaacaggaattcaagctgttggg
cagaaaatgaatgcacctaccaccaaaacaagcataataccagcccagaagaactgggag
ttagtaaaacaaagttctcaattgttgccaggtaactcatcaaaatctccttctcctgtt
gttggaaacaaaaatggtagtaaagttgaagataaagttcataaggatacagttactgat
gttaaacaagcaaatgataaacatgtaaaaactgatgttgaaacaaaaggaaaaacaatg
gaaaataaagagaaaaatgttaataaaggaagaaatgaaatggataatagtggtttgtca
aagaaacaagtatcaaggagtgattcaagcaatggaatagaatcaaaggaatttaaggaa
ggaattgaaaccactcagaatgacaacagtaatgacagtgtagaaataaaactggagaat
gtgaaagataactctgaaaagatggatgttgatgatgtaaatatggaatctgttaaagaa
gaggccgatcaaggggaaagaaaagataaaaaggaagattttaatcctatggatgctatg
atatggaataatggtataggggaattaccaggcagtaatttaaagttccatttgaatgat
ctcggtattcttgaagttttgaatgatgaccttgaatgtaatgagaccttgaatacaagt
gatgagttagatcatatagagactacaaatgacacagagaaagaacccaaacaagaaaag
aagacagaaaagctagagccgggaagtaagcagggtaaaatgctaagaacctctaaagaa
gtaagcaacaaggatgagataagtcagtgtgaaaattgtgccgaatacggtttcacaaca
gacttttataaagatggccgcttttgcagtcagacatgtattcgagctttcgaaagcaaa
catatgagggaagtgaaaaagcaaggaactatgtcaaagatgatacttaacatgaaaaaa
gggaagaaaaagttgctgttaaaagatggcgtacccaaagatagagatgtcaaagctgat
cctcctactccaggcaagaaatccaaagcgtttgtttggacaagatatcttgaacaggaa
aaagctgtagaagccccagcaagactttttaaaaatccattcccctcggtgaaaaataat
ttccgtattggaatgaaattggaaggtgtcgacccaatgcaccaatcaaagttctgtgtt
ctcagtgtagcggaggtcagtgggtacagagtgaggctacattttgatggttattctgaa
tgctttgatttctggttagatattgactctccttttatatttcctgtcggattttgtgaa
aaacttgggaaaactctccagccacctaaaggattcagtgtggatgagttctcatggaca
tcttacttgaagttaaccaagggtgtaccagcaccaaaatctcttttctcaaatcagcca
gttcagtctgtaaccccaaacttgttccgtgttggtagcaagctggaagctgtagacaag
aagaattcctcattgatatgcgtggcgagtgtagcagatactctcggtgacaaagttctg
atacattttgacagctgggaagataactacgactactggtgtgatatgacatcaccattt
atacatccaatcggatactgtgaggagactgaactagtactgtcaccacctctagattgg
aaagatgtaactttgttctcgtgggaaaagttccttaataaaacaaaatcacagcaagtg
cctgcaagggcctttaaacctgtaagtgaccgaggtcttcctccaccagtaaagctggaa
atagtagaaaaacaaacccctctggtcagggtgnngacaatagaggaagtagaaaattac
atggttaaaatccactttgacggctggtccgacatctacgattactggttagaagacgat
tcccccgaccttcatcctccgggttggtgcgccaagaccggtcatcctcttgtaccacct
attactccctcagatttagtggtaacaaccggacctggtgtttgccctaccccaggctgt
aaagggattggacacattaaaggtccaaaatattccggtcatcacagtacatttggctgc
ccatactcagacatcaacatgaacaaggagtcggttctcggtgacagattgaactctgta
gctatcaggcctgaggatacggtatccaggcattatgatgaacacagaacatcgccagat
tctaaaaaacacacagattctggacaacatggtgatatcccaaagaaacttggaagagga
agaaaaccaaagagttattatgtagccttagaagaacagaaagtggcaagagaaaaagag
agattagagaaagaagaaacattaagacaaggaatccataattcggtgttctcatcttcc
atgatctcaacacctaaaccagatgtgccattatgttgggaacaacattgtaaattgttg
ccaggggtaaccagtatccgtggcaacgatgttaacaagtggaccatagatcaagtggca
gcttttataaatactctcccagggtgtgaagagcaggcaaaacttttcaaagaggagcaa
atagatggagaggcattcctgttgttaactcagtcagatattgtgaaaataatgaacatt
aaacttggccctgcattaaaaatattcaacagtatcgtcatgttcaagaactcaatagaa
gtatag
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integrated database retrieval system
