Ruditapes philippinarum (Manila clam): 132724335
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Entry
132724335 CDS
T09557
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132724335
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
132724335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
CILP_C
CILP
TSP_1
Ig_3
TSP1_spondin
CILP_5th
Ig_2
I-set
CarboxypepD_reg
TSP1_ADAMTS
ig
V-set
FAM171A1-2-B_N
CILP_8th
DUF5101
Motif
Other DBs
NCBI-GeneID:
132724335
NCBI-ProteinID:
XP_060565161
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MAIKYVIYIVLAICITLEISSSSVSRDVVLLLDSSDDYRSKYFELEKQFAIDVIEGIYNQ
DTRIGVYTFGRKSHAQFNLDLYSDIDQMRYAINHMWYSTGNGNLEDAIDYTIDNAFNELS
GNRGCVPNVLVILTHKAVTDPGRLAIIDEKLRLNIIRAFVLQFTSNASADFIPITGESSR
IINVQGLAHLNKESSTIIQKIGSDLPRSGCGQLTTWTAWSDCSSTCNFGQKFRTRECVKD
HDNDTDCIGLLSDENTCTVTTCSVDGAWSYWGSWAGCSKSCDTGVQTRFRTCTMPEPYSG
GKVCEGVSTESRNCNDWPCPDCSKTCPSGGQLSSDCQLCLCATITLFGRITDDNNSTVEG
ANIYLGSRRNEPIASTDSFGKYRVDGVCIMNEDIIIQGKRYVELRVLPFEVNVTHWRMDA
IIEKKVTPVFNLQPKNKIRMVGQSFSLCCSAIGYPPPTSYIWYKNRAELLNQGKSGSLIF
QSASKEDSAVYKCSTETDAGVSQSSEAIVEVKAFSADTCGPPSSKLLQLPAGCYVSGDNS
QNDTLDVGTCEKSACMLSSLRDNGTCSDWWFYHCCDVKDIEMVSITCDGFTYQTSRVTSC
ECNLCVHKTTVYGRVTGRENKTFIPLQLGNIYVGNVEIGRTNMAGFFNFEAPSDQTRLVV
TFRDTVFKKFLDVTKIIEIIEGKENHVTIVAPIKPDPVQFNSNIGMEFQVGASDDGSPAL
GSIGIPENALIDLNGEPFTGTANAVMYFVDPRDRNSLDTANGEFVSETEDGSSSPLNTYG
LFNLGVFDGSGNELRINKKLGISFDTSVLNVTLDENGDPDLAIWDYDTNKGVWVENAKFY
FEQVVKNGRKLLSNYIHADIDLDKIKTIEITEEVVTGEERVQTGWTNWYRNIDERRPIFD
YVPIKDEQVKQGVCYVSVSVYEDLSLKEPYPGSAEITLYTRERDLSKYLGKSNARVINGH
ACIVTFCDKLVYLSVKDGQDVNLYPGQHVLPFGYRVTERDREINFESIDRGVSYRCPDPS
MDCKGPMYQYRDHSDCRKVTSKSKTHQFKFAPFTRSPSMSYTVGSDNIYDKMLSWYPVSP
ETITFRACFMKVLVKIKGAYDLRLLAKSLLHTFDGQEFGTHDVGPITSPNARNDEIRAAC
FEFRCPGFIRNGSQEIFDLSTAIEVHLTTKEQKKCSFRGLNSNLQGFTPIRNSKGDMGFR
FTAAPGNNFGPFYGIYVYDKSSGDVEKICNSGTDSGVLLSGLMDPERNAAVEFDCL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaatacgtgatatacatagttttggctatttgcattacattggaaatttcc
agttcgagcgtttcaagagacgtcgtgcttttgttagactcatctgatgattacagatct
aaatactttgaacttgaaaagcaatttgcaatagatgttatcgaaggaatctacaaccaa
gataccagaattggcgtttatacttttggacgaaaatctcatgcccaattcaatttagat
ctttacagtgacattgatcaaatgcgatatgcaataaatcacatgtggtacagtaccggc
aatggtaatcttgaagatgccattgactatacaatagataatgcattcaacgagctgtca
ggcaatcgaggatgtgttccaaacgtacttgttattttaacccataaagctgttactgat
cctgggcggttagcgataatcgatgagaagcttagacttaacatcattcgagcatttgta
ctgcagtttacaagcaatgcgagtgcagatttcataccaattacaggcgaatcctctcgt
attatcaatgttcaaggtttagctcatcttaacaaagaatcgtcgacgatcattcagaaa
attggttcagatttgcctcgatcaggctgtggacaattgaccacttggactgcttggtca
gattgcagttcaacctgcaatttcggtcaaaaatttcgaaccagggaatgtgtaaaggat
cacgataatgatacagactgtatcggacttctgtctgacgaaaatacatgtactgtaacc
acatgctcagttgatggtgcgtggagctactggggaagttgggcaggttgctctaaatca
tgcgatacgggagttcaaacccgatttaggacatgtactatgcctgaaccatacagtggc
ggaaaggtttgcgaaggtgtttcgacagaatccagaaattgcaatgattggccttgtcct
gattgttctaagacatgtccttcggggggacaattatcatctgattgccaactttgtttg
tgtgctactataacactatttggccgtataacagatgataacaattcaactgtagaaggc
gcaaatatttatctcgggtccaggagaaacgaaccgattgcttcaacagatagctttgga
aaatatcgtgtcgatggtgtttgtatcatgaatgaagatatcataattcaaggaaaacgt
tatgttgagctaagagtccttccattcgaagtaaatgtaacacattggagaatggacgct
atcatcgaaaagaaagttacacctgttttcaatttgcaaccaaagaacaagatacgtatg
gtcggtcaaagttttagcctttgctgttctgcgattggatatccacctccaacttcttat
atatggtacaaaaatagagcggaattgctaaatcaaggaaagagtggctcgcttattttc
cagtcagcatctaaagaggactcggctgtatacaaatgttcaacagaaacggatgcgggt
gtctcacaatcgtcagaagccatcgtagaagtaaaagctttttcggctgacacttgtggt
cctccttcgtcaaaactgctacaactaccagccggatgttacgtatcaggtgacaatagt
cagaacgataccctagatgttggtacgtgcgaaaaatccgcatgcatgctgtcatctcta
agggataatggtacttgttcagactggtggttttatcattgttgcgatgtaaaagacatt
gaaatggtttcgataacttgcgacggtttcacataccaaacctcccgtgtaacgtcctgt
gaatgtaacttatgcgtgcataaaacaactgtttacggtcgcgttacaggaagagaaaat
aagacatttattcctctacagcttggaaacatatatgtcggtaatgtagaaatcggaaga
acaaatatggccggattttttaatttcgaagctccaagcgatcaaacaagattagttgtg
acatttcgtgatacggtttttaaaaaattcttagatgtaacaaagattatcgaaattatc
gaaggaaaagaaaaccacgttacaatagtagctccaatcaaaccggatccggtgcaattt
aactctaacataggaatggaatttcaagtgggtgcgtctgatgacggctctccagcatta
ggaagcattggaattccagaaaatgctctcattgatctaaatggtgaaccgtttaccgga
actgctaatgcagttatgtactttgttgatccgcgtgataggaatagtctcgatactgcc
aatggagaatttgtttccgaaaccgaagacggatcatcttcaccacttaatacgtacggt
ctttttaatttaggtgtttttgatggctctggaaatgagttgagaataaacaagaaatta
gggatttcatttgacacatccgtactaaatgttaccctagatgaaaacggtgatcctgat
cttgcaatatgggactacgatacaaacaaaggtgtttgggttgaaaatgcaaagttttac
tttgaacaggttgtgaaaaacggtagaaaacttttatctaattatatacatgcagacatt
gatctagataaaataaaaacaattgagataacggaggaagtagttactggagaggaacgc
gtacagacgggatggactaattggtacagaaatattgatgaacgaaggccaatatttgat
tatgttcctataaaggatgagcaggtaaaacaaggggtctgttatgtaagtgtgtcagta
tatgaagacctgtcgttgaaagagccttatccaggcagtgcagaaataacattatataca
agagaacgtgacctgtcaaaatacctcgggaaatcaaatgcacgtgtcattaatggccac
gcctgtatagttacattctgcgataaattagtgtatttgagtgtaaaagacggtcaagat
gttaatttatatccaggacagcatgttttgccctttggatatcgtgtaactgaaagagat
cgtgagataaactttgagtctatcgaccggggcgtttcatacagatgtcctgatccttca
atggattgcaaagggccaatgtatcagtacagggatcattctgattgtagaaaagtaact
tccaaaagtaaaacacatcagtttaagtttgcaccttttacgagatctcccagcatgtca
tacacggttggttctgataatatttatgacaaaatgttgtcatggtaccctgtatcacct
gaaacaatcacatttcgagcatgtttcatgaaggtattggttaagatcaagggagcatat
gatcttcgtttgttagccaaaagtttgttacatacgtttgatggacaggagttcggaaca
catgatgttggtccaatcacttcaccaaacgctagaaatgatgaaataagagcagcatgt
tttgaatttagatgccctggatttattagaaatggcagtcaagagatttttgatttgtcg
acagcgatcgaagtccatttaactacaaaggaacaaaagaaatgttcatttcggggttta
aacagtaacttgcaaggtttcactccaataagaaatagtaaaggagacatgggatttcga
ttcactgcagcgcctggaaacaactttggtccattttatgggatatatgtttatgacaag
tcctctggtgatgttgagaaaatttgtaattctggaacagattccggcgtgcttttgtca
ggattaatggacccagaaagaaatgcagctgttgaattcgactgtctataa
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