Ruditapes philippinarum (Manila clam): 132724356
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Entry
132724356 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute-2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132724356
03036 Chromosome and associated proteins [BR:
rphi03036
]
132724356
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132724356
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132724356
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
132724356
microRNA pathway
RISC loading complex
132724356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
ArgoMid
PAZ
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
132724356
NCBI-ProteinID:
XP_060565548
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MFPIQPGISSSMMTGQMNGSVGGQSPFVFPPVQSDVPPPSLPFPGLPSDMLQPPVTGPPA
LPPGPAPVDFFCPPRPDTGTDGRPILLRANHFQVRIPKGAIHHYDISITPDKCPRRVNRE
IVETMVQAYQQKIFQGSKPVFDGRKNLYTRDPLPIGKDKVELELTLPGEGKDRIFKVTMR
WVAQVSLAALEEALLGRSQRIPIEATQALDVVMRHLPSMNYTPVGRSFFSPPEGYDHPLG
GGREVWFGFHQSVRPSHWKMMLNIDVSATAFYKAQPVIEFMCEVLDMKDMSEQKRPLTDS
QRVKFTKEIRGLKVEITHCGQMKRKYRVCNVTRRPAQTQSFPLQLDSGQTVECTVARYFL
ERYKMKLAYPHLPCLQVGQEQKHTYLPLEVCNVVGGQRCIKKLTDNQTSTMIKATARSAP
DREKEINNLVRKANFNSDPYLQTFGISIIPQMVDVHGRVLNPPKIQYGGRTKAQAIPNQG
VWDMRGKQFYSGVEIRVWAIACFAPQRTVREDALRNFTQQLQRISNDAGMPILGQPCFCK
YATGPDQVEPMFRYLKNTYQGLQVIVVVLPGKTPVYAEVKRVGDICLVFATQXFQAKKVK
KDNPQTLPNPCSKKNVKNWRHQNISFPKLRPTVFREPVIFLGADVTHPPAGDASKPSIAA
VVASMDAHPSRYSATVRVQQHRQEIIQELASMVKELLIQFYKSTRFKPTRIIFYRDGVSE
GQFQSVLSHELRAVREACMKLEAEYQPGITFIVVQKRHHTRLFCADRKDQIGRSGNIPAG
TTVDVGITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSADELQMLTYQLCHTYVRC
TRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSRYSDNSDERAPSVMARAVTVHPDTV
KFMYFA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctattcaaccaggtataagctcaagcatgatgacgggtcagatgaatggctcg
gttggtggccagtcaccttttgtattcccaccagtgcaatcagatgtaccaccaccaagc
ctgccctttcctgggctcccatctgatatgcttcaaccgccggtgaccggtccaccggca
cttcctccgggaccagcaccagtagacttcttctgcccaccgagaccggacaccggaact
gatggtcgcccaattcttcttcgtgctaaccattttcaagtgagaataccaaaaggggct
atccatcactatgacatctcaattacaccagataaatgcccacgtagggttaacagagag
atcgtagaaacaatggtgcaggcatatcaacaaaagattttccagggatccaagccagta
tttgatggaaggaaaaacctctacaccagagatccactgccaataggcaaagacaaggtg
gaactagagttaacgctcccgggtgaaggcaaagatagaatatttaaagtaaccatgcgc
tgggttgcccaggtgagtttggccgcgttagaggaggcactactgggtcggtctcagaga
attcccatcgaggcaacacaggcgctggacgttgtcatgagacatctacccagtatgaat
tatacgccagttggtcggtcttttttctcaccaccagagggttacgatcatccgttaggc
ggaggtagagaggtgtggtttggtttccatcagagcgtacgaccttcacattggaaaatg
atgctaaatatagatgtatcagcgacagcattttacaaagcgcagccagttatagagttt
atgtgcgaggtattagatatgaaagatatgtcagaacaaaaacgtcccctcactgactct
cagagagttaaattcaccaaagaaatcagaggtctaaaggtagagattacacattgtgga
caaatgaagagaaaatatagagtatgtaatgtgacacgtagaccagcacaaacacaatct
ttcccactacaattagattcaggacagacagtcgagtgtacagtagcgagatatttcctg
gagagatataagatgaagctagcctacccacatctaccatgtctacaagtaggacaggaa
caaaaacatacatatctaccactggaagtgtgcaatgttgttggcggacagagatgtata
aagaaactcacagataatcagacttcgaccatgatcaaggcgacagctaggtcagcacca
gacagagaaaaggaaattaacaatcttgtacgtaaagcgaacttcaactcggacccgtac
cttcagacgtttggaatcagtattataccacagatggtggacgttcacggccgagtcctg
aacccacctaaaattcagtatggaggaaggaccaaggcgcaagccattcccaatcaaggt
gtgtgggatatgagagggaagcagttttacagcggtgtagagatacgagtgtgggctata
gcatgttttgctccccagagaaccgtccgagaagatgcgctcaggaatttcacccagcag
ttacagagaatttccaatgacgcgggcatgccaatacttggtcagccatgtttctgcaaa
tatgccaccggacccgatcaggttgaaccgatgttccgatatttaaagaacacgtaccag
ggcctacaggtgatagttgttgttctgcctgggaaaacaccggtttatgctgaagtgaag
cgtgtaggagacatatgtttggtttttgcaacacaanattttcaggcaaagaaagtaaaa
aaagacaacccacagacccttcccaacccgtgttcaaaaaaaaacgtgaaaaattggagg
catcaaaatatatctttccccaagttacgacctacagtattccgagagcctgtaatattc
ctaggtgctgacgtaactcacccgccagctggagacgcaagtaaaccttctatagcagct
gttgttgctagcatggatgctcaccctagtcgatactcagccaccgtgcgggtacaacag
catagacaggagatcatacaggaactggcttccatggtaaaggaacttctcatacagttc
tacaagtctacgaggttcaagcccactcgtatcatattctacagagacggtgtgtccgaa
gggcagtttcagtcggtattgtctcacgaactgcgagctgtgcgtgaagcgtgtatgaaa
ctagaggccgagtaccagccaggtattacattcattgtcgtacagaaacgtcaccatact
cgtctcttctgcgctgacagaaaggaccagatcggccgtagtggtaacattccagctgga
accaccgttgatgtagggatcacgcatccaaccgagtttgatttctacctttgtagtcat
gccggtattcagggtacaagcagaccatctcactaccatgtattatgggacgataaccga
ttctcggcagatgagttacagatgctcacgtaccagttgtgccatacgtatgtcaggtgt
actcgcagtgtctccattccagctccggcttattacgctcatctagtagcgttccgagct
aggtaccatctcgtagagaaagaacacgacagtggcgaaggcagtcgatattccgacaac
agtgacgagagagcaccgtcagtgatggcacgtgccgttaccgtgcaccctgacactgtc
aagttcatgtactttgcatga
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