Ruditapes philippinarum (Manila clam): 132724453
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Entry
132724453 CDS
T09557
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132724453
Enzymes [BR:
rphi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
132724453
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
132724453
Prokaryotic type
132724453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
132724453
NCBI-ProteinID:
XP_060565300
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MIRVVRNVRLRTLKLLAQPKLELYEGKETIIHYLKTKSSITTLEKTFLPLLCNRFMSTMS
SDKDTANKKRKLDSDDQLKENGEPAVKKTSTEDFEEKIKDTRMSVCGSVAEFKFNKKRVR
VLSKTQDFPDESNGVVYWMSRDQRVHDNWALLYAQKLALKLEVPLHVCFCLVPKFLEATI
RHYTFMLEGLREIEKECKELGISFHLLIGHAKEVLPTFVKEHSIGGLVTDFCPLRVPRAW
VDDVVKAVPKDIAVCQVDAHNLVPCWEASPKLEYGARTIRNKIHNQLSGFLTEYPPVCKH
KFQPKNEPKPIDWDSAYASLEVNQTVGPVEWAKPGTSAGIKMLESFCKERLRYFGSERNN
PNKNSLSNLSPWIHFGQISVQRCVLMVKQYRGKYKEGVDAYIEEAVIRRELSDNFCYYNE
HYDSIEGAYDWAKQTLKAHEKDKREYVYSREKLEQGKTHDHLWNAAQNQMVNEGKMHGFM
RMYWAKKILEWTSSPSEALEIAIYLNDKYNLDGRDPNGYVGCMWSICGIHDQGWKEREVF
GKIRYMNYNGCKRKFDVGSYEAKYRRQTISK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgataagagtggtaagaaatgttcgtctgagaacattaaaactactagcccaacccaaa
ttagaattatatgagggtaaagaaacaataattcactacttgaaaacaaaatcttcaatt
acaactcttgaaaagacatttctaccattgttgtgtaacaggttcatgtccaccatgtcg
agtgataaagacactgccaacaagaagaggaagttggatagtgatgaccagttgaaggaa
aatggtgaacctgcagttaagaaaacatctactgaagattttgaggagaaaatcaaagac
acgcggatgtcagtatgtgggtcggttgcagagtttaaattcaacaagaaacgcgtacgc
gtgttgtcaaagactcaggattttccagatgaaagtaatggtgtggtctactggatgtca
agagatcaaagagtgcatgataactgggcattactttatgctcaaaaattggctttgaag
ttggaggttccccttcatgtttgtttctgtctggttccgaaattcctcgaggcaaccatc
agacattacacattcatgttggaaggactaagggaaattgaaaaggagtgtaaagaactt
gggataagtttccatctgctaataggccatgccaaggaagttcttcctacatttgttaag
gagcattctattggtggactggtcactgatttctgtccacttagagtaccaagagcatgg
gtagatgatgttgtgaaggctgtaccaaaggatattgctgtttgccaggttgatgcccac
aaccttgtaccgtgttgggaagcttcaccgaagctagagtatggtgccagaacaatacgt
aacaaaatacataaccagttgtccggtttcctcacagaatatccaccagtctgtaaacac
aagtttcagcctaaaaatgaaccaaagccaatagactgggactcggcctatgcaagcctt
gaagtgaaccagactgtgggcccggtagaatgggcaaagcctggaaccagcgctgggata
aaaatgcttgaatcattctgtaaggaacggctgagatattttggcagtgagaggaataat
ccgaacaaaaattcacttagtaacctgtctccatggatacattttggtcagatatctgta
cagcgctgtgtcctcatggtgaaacagtacagggggaaatacaaggaaggggtagatgcc
tacatagaggaggccgtcatcagacgagaactgtccgataacttctgctactacaatgaa
cactatgatagtatagaaggagcatatgattgggctaaacagactttgaaagctcatgag
aaagataaaagagaatatgtttatagcagggaaaaactggaacaaggcaagactcatgat
cacctgtggaatgctgcacagaatcagatggtaaatgaagggaagatgcatgggtttatg
agaatgtactgggcaaagaagatccttgaatggacaagtagtccaagtgaagctctagag
atagctatatacctcaatgataaatacaacttggacggacgagatcccaatggttatgtg
ggttgcatgtggtcgatctgtggaatacacgaccagggctggaaggagagagaagtgttt
ggtaagatacggtacatgaactacaacgggtgtaagagaaagtttgacgtgggcagttac
gaggcaaaataccgtcggcagactatcagtaaatga
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