KEGG   Ruditapes philippinarum (Manila clam): 132724486
Entry
132724486         CDS       T09557                                 
Name
(RefSeq) nucleoporin Nup37-like
  KO
K14302  nuclear pore complex protein Nup37
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132724486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rphi03019]
    132724486
   03036 Chromosome and associated proteins [BR:rphi03036]
    132724486
Messenger RNA biogenesis [BR:rphi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132724486
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    132724486
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N RodZ_C DUF6885 RNA_lig_T4_1
Other DBs
NCBI-GeneID: 132724486
NCBI-ProteinID: XP_060565342
LinkDB
Position
Unknown
AA seq 310 aa
MIESGKNPDFEIPTEDITYVVEFCNTETSSHLLAAGTDSKVSVYLCKFKEEDDDVEDFDY
ERLAEFQNGCRATAIAWSPETTITSLPKVLRFAVAGSDRRIRVFTTDLKGNDSVEILEGH
TDFVNSVTFDPDTGDQLASVGDDRWCQIWDRDGNKQLKFPLGAPGMSVCWHREEPMKVMV
GQKDGVIKIFSLSGQQQLMSFDTGQVPLMEADWSVGNKGLLIGAVAGTDWFMFDVSVSSR
PVERRQIHVEGARHFRWAKCHDSLVATVGRPGRQIKVFNTKHQQNPLTISQPITYSISWH
QKVTCPCCRG
NT seq 933 nt   +upstreamnt  +downstreamnt
atgatagaatctggtaaaaatccagattttgagatacctactgaagatataacatatgtt
gttgaattttgtaatacagaaacaagttcccatcttctagccgcgggtacagattcgaaa
gtttcagtatacctttgtaaattcaaggaagaggacgatgatgttgaagattttgactat
gaacgactcgctgaatttcagaatggttgccgggcaacagcaatagcatggagtccagaa
acaaccatcacctccttgcctaaagttctcagatttgctgtagctggaagtgacagaaga
attcgggtttttaccacagatttgaaaggaaatgactccgtagaaatattagaaggacac
acagactttgtgaattcagtgacctttgaccctgacacgggagaccagcttgctagtgta
ggggatgacaggtggtgccagatctgggatagagatggaaacaaacagttgaagtttccc
cttggtgccccaggaatgtcagtttgttggcatagagaggaaccaatgaaggttatggtg
ggtcagaaagatggggttataaaaattttcagccttagtggacaacaacagttgatgtct
tttgatacgggacaggtgccactgatggaagctgattggagtgtcgggaataaagggctg
cttataggggctgtggcggggacagactggtttatgtttgacgtttccgtgtcaagtcgt
ccagtagaaagacgtcagatacatgtagaaggtgcgagacatttccgttgggcgaaatgt
catgattccctcgttgcgactgtaggaagacctggccgccagatcaaagtattcaataca
aaacatcaacagaatcctctgacaatatctcaaccgattacatacagtatcagctggcac
cagaaagttacctgcccttgctgccgggggtga

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