Ruditapes philippinarum (Manila clam): 132724528
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Entry
132724528 CDS
T09557
Name
(RefSeq) cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132724528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132724528
03036 Chromosome and associated proteins [BR:
rphi03036
]
132724528
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
132724528
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
132724528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Tricorn_2nd
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
WDR54
CFAP43_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
132724528
NCBI-ProteinID:
XP_060565378
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MYNRGVLLNNPFKKGVKDYLQLVYTNMAERKYTRFHRTAFDRFIPFRPNLDVETSHARLM
LRLPDCAENELGQFKSPVTKSYARLLSETTHVEDGNVLPICSKPFASPFKKRLTQLFPTR
PDEGYSSPTTDKIRSIPTSPDCIMDMPGLRDDFYTNLLDWSNKNLIAVALFQSAYVWDAE
SKDCQRIEIHFPQSYYYISALAWSPRDKALAISDNDGEITICDVEKLQSQRKFVPLRQKC
SVGALKWTNYGIISGNRRGEIRIHDDRCKDSSALKCMDGHHRKDVCGLSVSSGTSYLASG
GDDGHVNIWDLRMMTNCKTIKAHSACVKALSWCPWRQNVIATGGGLNDGNIRLWYAHTGE
QLAETATNLQVCGLLWSEEYNELVSALSSQTPDRNDLVVWNMKKFEFEAVAKLRQHMARP
LHIALSPDETTIASAGADEALCLWNTFPKRSRRKQWSPWDKSPLNMYNYIR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatcgtggcgtactgttgaataatccatttaaaaaaggtgtgaaagattattta
caattagtatataccaatatggctgaacggaagtacacaaggtttcatcggacggcgttt
gatagattcatacctttccggccgaacttggatgttgaaacgtcacacgcgagacttatg
ctgcgtttaccggactgtgcagagaatgaacttggtcagttcaagagcccagttacaaaa
tcgtacgctcgacttttgtcagaaacaacgcatgtggaggatggaaatgttttgccgata
tgcagtaaaccattcgcaagtcctttcaaaaagcgattgactcaactatttcctacaaga
ccagatgaagggtacagttctccaacaactgacaaaatccgaagtattccgacatcacca
gattgcatcatggacatgccaggacttagagacgatttttacacaaatttgctagattgg
agcaataagaatttaattgccgttgcactgttccagtcagcatatgtatgggacgccgag
tccaaagactgtcagagaattgaaatacattttccacaatcatattactatatatcggca
ctggcctggagtccaagagacaaagcattggccatatctgataacgacggagagataacg
atttgtgacgttgaaaagttgcagtctcagagaaaatttgttccacttagacaaaaatgt
tcagttggagcactcaagtggacaaactacggaattataagcggaaaccggaggggcgag
atacggattcatgatgacagatgtaaagatagttcggcgttaaaatgcatggatggacat
caccggaaagacgtatgcggattatcagtctcatctggcacgtcatatttggcaagtgga
ggtgacgacggccatgttaatatttgggatctacgaatgatgacaaactgtaaaactatt
aaggcccattctgcgtgtgttaaggcattgtcttggtgtccgtggagacagaatgtcata
gcgacaggtggtgggttaaatgatggtaacatacggctatggtacgcacatacgggggaa
caacttgcagaaaccgccactaatttacaggtttgtggtttgttgtggtcagaagaatac
aatgaactggtgtcggccctaagctctcagactcccgatagaaacgacctggttgtctgg
aacatgaagaagttcgaatttgaagctgtggctaaactccgtcaacatatggcacgcccg
ctacacatagcacttagtccggatgaaactaccatagcttcggcgggcgctgacgaggcc
ttgtgtttgtggaatacgtttccaaagcggtcaagacgtaagcaatggtcaccttgggat
aaatccccactgaacatgtataattatataagataa
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