Ruditapes philippinarum (Manila clam): 132724977
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Entry
132724977 CDS
T09557
Name
(RefSeq) mRNA-capping enzyme-like isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132724977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132724977
Enzymes [BR:
rphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
132724977
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
132724977
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
132724977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSPc
Tc-R-P
PTP-NADK
Y_phosphatase
PTPlike_phytase
PTP-SAK
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
132724977
NCBI-ProteinID:
XP_060565947
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MPCARYNWKGQSGSKSSFHRLKRFYRVFKLKNRKMPRWKSKSTRGQSRSATRSRGRRSHQ
TETSMQPIVEQPVTNTHVPGVLGQQSLYPSNSMQVPYTQQSQGAVPSMASVSENFASTSH
GGQMMSTAGEMFESPVVGQPPRVHETSVSGVNIVTPLNLDPPNYWLKCPQKGDIIIDKFI
PFKTPLDSKFVIDLENRFDFDELLKSLENPERNLGLVVDLTNTNKYYDSNAVMATGCEYV
KIQCIGHGATPSKEQTAQFIQICDRFIERKPNKIIGVHCTHGFNRTGFLIIAYMIERLNY
SLNNAVQCFAEARPQGIYKQTYLRELYDRYKKEGDTLPVSPGLPEWHDETD
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgccatgtgcgcgttataattggaaaggacagagtggatcgaaaagttcatttcaccgt
ttgaagaggttttacagggtgttcaagctcaaaaacaggaaaatgcctcgttggaagagt
aaatcgacgcgagggcaatcaaggtcagccacaaggtctagagggagacggtcccatcag
actgaaacctccatgcaacccattgtagagcagccggtaacaaatacccatgtcccaggg
gtgttgggacaacagtcgctctatccttcaaattcaatgcaagtaccatatacacagcaa
agtcagggagctgttccttcaatggcctcagtatcggaaaattttgcttcaacttcacac
ggcgggcagatgatgtcaactgctggagaaatgttcgagtcacctgtggttgggcaaccc
ccgagggtacatgaaacatcagtttcaggagtaaacattgtaacgccactcaaccttgat
ccaccaaattactggttaaaatgtcctcagaagggagatattataatcgacaaatttatt
ccattcaagacaccgctggacagtaaatttgtcattgatcttgaaaacagattcgacttt
gatgagttgttaaagtcattagagaatcctgagagaaatctaggccttgtggtggatctg
acaaatactaacaagtattatgacagtaatgcagtgatggcgacggggtgtgaatatgtg
aagatacaatgcataggccatggagcaactccctcaaaagaacagactgcgcaatttata
cagatttgtgatagatttatcgagcggaaacctaataaaataataggtgtacattgtact
catggttttaacagaacgggcttcctcataatcgcttatatgatagaacggctgaactac
agtttaaacaatgctgtgcagtgttttgctgaggctcggcctcaaggcatatacaaacaa
acatatttacgagagttgtacgatcgctataaaaaagaaggcgatacactaccagtgtct
cccggtcttcctgaatggcatgatgaaactgactga
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