Ruditapes philippinarum (Manila clam): 132725175
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Entry
132725175 CDS
T09557
Name
(RefSeq) glycine receptor subunit alpha-2-like
KO
K05195
glycine receptor alpha-3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132725175
04082 Neuroactive ligand signaling
132725175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132725175
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Glycine
132725175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132725175
NCBI-ProteinID:
XP_060566246
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MEFTLQRNMMTSEYKLVALVFITMTQVIAGVSDQSNSTMYKILRRLTTDYHKELPPAYER
SDSQVMVNINLYIQSMYAFNDVNMDYSLTMFLRERWVDERLSFIETQSNHRLELEGSMVD
KLWVPDVYILNEKKSNYHDVTVPNKMVHLYPNGTIQFSAKVTGTFSCIMFLKKYPFDTQI
CHLEMESYGHSIETLKFRWSDEAVSMATGIEFPHFWLVNFTTYECEKMYYSGTYLMYPCI
GVMFTMQRNYEFHILHVYLPSILIVLLSWLNFWLDCTAVPARITLGLLTVLTMTTQSSNS
MYNLSHVSYLKAIDVYMAVCLTFVFLGLVEFAYVNVLTRAERKDPAEKRVGLKVADVALK
TQIDKTKPIFNNMTTWNTLLCFKSLSNLGRAHLVDKISRILFPFVFGLFNLFYWCFYVIF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaatttacattacaacggaatatgatgacgtcagaatacaagctggttgcactggtt
ttcattacaatgacgcaagttatagcaggagtgtcagaccagtcgaattcaacaatgtac
aagatattgcgccgattaactactgattaccacaaagaactgcctccagcatatgagcgt
tctgacagtcaggtgatggtaaatataaacttgtacatacaatccatgtatgcctttaac
gatgttaatatggactattctttgaccatgtttctacgggaacgctgggttgacgaacga
ttaagcttcattgaaacacaatcaaatcatagactagagttggaaggctcaatggtcgat
aaactatgggtacctgatgtttatatcctgaacgaaaaaaagtcaaactatcatgatgtt
acagttccaaataagatggtgcatctttatccaaacggcacaatccaatttagtgcaaaa
gttactggaactttttcatgtataatgtttctgaaaaaatacccgttcgatacacaaata
tgccacttagagatggaaagttatggacacagtatagaaacattgaagtttcgttggagc
gatgaagccgtatcaatggcaacaggcatagaatttcctcatttttggcttgtcaatttt
actacatatgaatgcgaaaagatgtattacagtggtacatatttgatgtacccatgtatt
ggagtgatgtttacaatgcaaagaaattacgagtttcacattttgcatgtttatttacca
agtattttgattgtacttttgtcttggttgaacttctggttggactgtacggcggttcct
gcaagaatcacacttggtcttctcacagtgctaaccatgacaacacaaagttctaactcc
atgtacaatctgtcgcatgtgtcatatctcaaggctattgacgtttatatggctgtgtgt
ctgacatttgtttttcttggccttgtggagtttgcctacgtaaatgttctcacacgtgcc
gagaggaaagacccagcagaaaaacgagttggactgaaagttgctgacgttgctttgaaa
acacaaatagataaaaccaaacctatcttcaacaatatgacgacatggaatacactcttg
tgcttcaaaagtctctcaaatttaggtcgtgcccaccttgttgacaagatttccaggatt
ttgtttccttttgtgtttgggttattcaacctgttttattggtgtttttatgttattttt
taa
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