Ruditapes philippinarum (Manila clam): 132725396
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Entry
132725396 CDS
T09557
Name
(RefSeq) 26S proteasome complex subunit SEM1-like
KO
K10881
26 proteasome complex subunit DSS1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03050
Proteasome
rphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
132725396
09124 Replication and repair
03440 Homologous recombination
132725396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132725396
04131 Membrane trafficking [BR:
rphi04131
]
132725396
03051 Proteasome [BR:
rphi03051
]
132725396
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132725396
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
132725396
Membrane trafficking [BR:
rphi04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
132725396
Proteasome [BR:
rphi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
132725396
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132725396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSS1_SEM1
DUF2947
Motif
Other DBs
NCBI-GeneID:
132725396
NCBI-ProteinID:
XP_060566485
LinkDB
All DBs
Position
Unknown
AA seq
76 aa
AA seq
DB search
MTEQKSKPELGLLEEDDEFEEFPAEDWADDEEDKQDVNVWEDNWDDDNIDDDFSLQLRAE
LEKQGKSMDGQEPMKT
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaaaatctaagccagagttgggattattagaggaagatgatgaatttgaa
gagtttccagctgaagattgggctgacgatgaggaagacaaacaggatgttaatgtatgg
gaagataattgggatgatgataacatagatgatgatttctcattacaacttagggcggaa
ttagaaaaacaaggcaaatccatggatggacaagaaccaatgaaaacatga
DBGET
integrated database retrieval system
