Ruditapes philippinarum (Manila clam): 132725688
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Entry
132725688 CDS
T09557
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132725688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132725688
03036 Chromosome and associated proteins [BR:
rphi03036
]
132725688
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132725688
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
132725688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Slu7
Motif
Other DBs
NCBI-GeneID:
132725688
NCBI-ProteinID:
XP_060566847
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MREKKKELEKFGYKNQDEPHKSYDEDVASKKIKKSLTPVVELEKKRGPPKKSTFDADELL
RKRLMSLYKSVYDYADSTGRLLRQIFMYLPSKKDYPDYYKVITDPIDLSIIEGKIKGNKY
PSEYNLMSDFDLMFKNARHYNEEGSQVYTDAITLEKALKAKWRVINQAAGTPRPGKSKTR
KGPAPTTLASRLQELYESIRDYQDTRGRTLSSPFMKVPAKTDYPDYYEVIKKPMDMSSIS
QKMLLKRYESMEDMVADFVQMFDNACKYNEPDSLIYKDALTLQRVCLEKKVELSDDFTNE
VPDVRAVVQEMMTNLFIATYNHQDEEGRCYSDSFSELPERDPGMDPNAERPLSFDKIKRN
LDRGRYRRMDRFQDDMFKVFSRARAMSRSDSQLYEDTVEMQMFFIKNRDALCKNGEVLLS
PALSFTEKHIHSIVEAEKLAKSVAEQAEDEKKTGDVEETPQVSTDGEGNESLKYKDQIYR
VGDFVYIEPRKTTKSGRIRKRNTKYLRDSDSEPHILCIEKIYTDNDGQQQVYGNWFYRPN
ETFHLATRKFLQKEVLKSDCYASTSPNQIIGRCFVMNVREYFKYKPEGYADNDVYVCEFR
YTSKTRSFKKIKLWSVPRSEELKLIERDVPFHPIRVASIFADKDKDEFDDGDTSILDKER
NDVVVNVGAPNEDGQILYEQMRTLTGVYKVGDCVYVKSDMDKPLIYRIDRMWADKYEQRY
FYGPLFIRPCDIEHPPTRLFYKNEMFICGVEEARTMDSVTGRCCVLHVKDFCTSRPTEVL
ESDVYICESKYHEVEKTVRRLSKGLKKHSLSPRVTDDEVLFFRKQIVPAKVEIAHTFNVI
NKQEPSPLLVKASEESLAYDGDESRDTFTTDTQPDILNESLDEYGMPIPAVIKTPVHTVK
KVEGITPSEGGSKKKGKGMNWRDKNKDKRTQISGYIVFSGEFRKIVQQENPECNFGEISR
LVGGKVRAKRYPSGFVLFSGDFRRKLTEEGKNHYTFGEISRMVGIQWRNLDKEDKDKYEE
KARRIAEEQQAKQADAERAFNMTLQQQQPQQQQHATASDSPRPSTPAQQGMMNGMSPAYM
SPQGPKGNQAMMPNGQRPPFKGQLYQSPGGPGMRPMGPNMSPYPGMTSIPYGQTPTVGAQ
APHTGAQLGPYPGSPAPHPSMGQTGMHVNQPAHILSQQPGQQQQQAPXSLLLLLSTRHLL
HHPGQLHQCLSQFHQGHRDYYTRRLISSI
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaaaaagaaagaattggaaaagtttggatataagaaccaggatgaaccacat
aaatcctatgatgaggatgtggccagtaaaaagataaaaaagagtttgacaccagtggtg
gaacttgaaaagaaacgtggaccaccaaagaagtctacatttgatgctgatgaacttctc
agaaagagattaatgtcattgtataaatcagtgtatgattatgctgatagcacaggtaga
ttgttacgtcagatatttatgtatctaccatcaaagaaggattatcctgactattataag
gttataacagatcctattgaccttagtataattgaaggcaagatcaaaggaaataagtat
ccatcagaatataacctgatgtcagactttgacctgatgtttaagaatgctcgacattat
aatgaggaaggttcccaggtttatacggatgctatcaccctggagaaggctctcaaagct
aaatggcgagttataaaccaagctgctggtacacctagaccaggcaaatcgaagacacgt
aaaggtcctgcaccaacaactttggcatcaagacttcaagaactttacgaatcaatcaga
gattatcaagatacaaggggaagaactctgtcaagtccattcatgaaagttccagcaaag
actgattacccggactattatgaagtaattaagaagccgatggacatgtcaagtatatct
cagaagatgttgttaaaacgttatgagtccatggaggatatggttgctgactttgttcaa
atgtttgacaacgcatgtaaatataatgagccggattctctcatatataaggatgccctg
acattacaaagggtgtgtctagaaaagaaggtggagctaagtgatgatttcaccaatgag
gttcctgatgtgcgagcagttgtacaggaaatgatgacaaatctatttatagctacatac
aaccatcaggacgaggaagggagatgttactcggactcattctcagaattaccagaacga
gatccaggaatggaccctaatgctgagaggccactgtcttttgacaagataaagagaaac
ctagatagagggcgttatcgtagaatggacaggtttcaggatgatatgtttaaagtgttt
tcacgagctcgtgctatgagtcgttctgactcacaactttacgaagacactgtagagatg
cagatgttctttatcaagaatagagatgcattgtgtaaaaatggcgaagtacttctgtca
ccggccctcagttttactgagaaacatatacatagtattgtagaggcagagaagttggca
aagagtgtggctgaacaagctgaagatgagaagaaaacaggtgatgtggaggagactcca
caagtatccactgatggagagggtaatgaaagtttgaaatacaaagatcagatatacagg
gttggtgattttgtctacatagaaccaaggaaaacaacaaagtcggggagaataagaaaa
agaaatacaaaatatttaagagattcagacagtgagccccatatattatgtatagagaaa
atctacactgataatgatggtcagcaacaggtgtatggtaactggttctaccgaccaaat
gagactttccacctggctaccagaaagtttctacagaaagaagtgttgaagagtgactgt
tacgctagcacgtcaccaaaccaaatcattggaagatgttttgtaatgaatgtccgagag
tatttcaaatataaaccagagggttatgccgacaatgatgtatatgtgtgtgagttcaga
tacaccagtaagacaagaagcttcaagaaaataaagctgtggtcagtaccaagaagtgag
gagctgaagttgatagaacgagatgtaccatttcacccgatacgtgtggcgtccatattt
gctgacaaagacaaagatgagtttgatgacggagataccagtatactggataaagaaaga
aatgatgttgttgtgaatgtgggagcacctaatgaagatggtcagatattatatgaacaa
atgaggacattgacaggggtgtacaaagttggtgattgtgtatatgtaaagtctgatatg
gataaaccattgatatacagaatagatagaatgtgggcagataaatatgaacagagatat
ttctatggtcctctgtttatacgaccatgtgacattgaacatccacctactagactgttt
tacaagaatgagatgtttatatgtggtgtagaggaggctagaaccatggatagtgttaca
ggaagatgttgtgttctacatgtgaaggacttctgtaccagtcgtcctacagaagtgttg
gaatctgatgtgtatatctgtgagtcaaaataccatgaggtagagaaaactgtcaggaga
ttgtcaaagggtctaaagaaacattcattgtcaccaagggtaacagatgatgaagttctc
ttcttccgtaaacagattgttccagctaaggtggaaatagcccacacattcaatgttatt
aataaacaggaaccatcgccacttctagtcaaagcatcggaggagagcctggcatatgat
ggagacgagtcacgtgacacgttcacgaccgacacccagccagatatattgaatgaatcc
ctggatgaatatggcatgccaatccctgctgttattaaaacaccagtacacacagtaaag
aaggttgagggaataacgccatcagaaggcggcagcaagaaaaaggggaaaggtatgaat
tggcgagacaaaaacaaagataagcgaacacaaatcagtggatatatagtgttctctgga
gaatttcgtaaaattgtacaacaagaaaacccagagtgcaattttggtgaaattagtcgt
cttgttggtgggaaggtccgagctaaacgatatcccagcggctttgtgttgttttcgggg
gattttaggaggaaattgacagaagaaggcaaaaatcattacacatttggagagataagt
cggatggtaggaattcagtggagaaacctggacaaggaagataaagataagtacgaggag
aaggctcgcaggatagctgaagaacaacaagccaaacaggccgatgccgagagagcattt
aacatgacacttcaacaacaacagccacaacaacaacaacatgctacagcaagtgatagt
ccaagacctagtacacctgcacaacaaggtatgatgaatggaatgagcccggcctacatg
tcaccacaggggccgaagggaaaccaagccatgatgccaaatggacagaggccacccttt
aagggtcaactctatcagtctccaggagggccaggaatgagacccatggggccaaatatg
tccccttaccctggtatgacatctattccatatggacagacaccaacagtcggggctcag
gctccacatacaggggctcagctgggaccataccctggcagccccgctccccaccccagc
atgggtcagactggtatgcatgtaaaccagccagcacatatactctcccagcaaccaggc
cagcaacaacaacaggcaccncnntcgttgttgttgttgttgtctacccgccacctcctc
caccaccccggccagcttcaccaatgtttgtcacagttccaccaaggacacagagattat
tacactcggaggcttatctcaagtatatag
DBGET
integrated database retrieval system
