Ruditapes philippinarum (Manila clam): 132725848
Help
Entry
132725848 CDS
T09557
Name
(RefSeq) methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00280
Valine, leucine and isoleucine degradation
rphi01100
Metabolic pathways
Module
rphi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
132725848
Enzymes [BR:
rphi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
132725848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
Motif
Other DBs
NCBI-GeneID:
132725848
NCBI-ProteinID:
XP_060567014
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MINICKCLRNAKVSCRKNIFNEYIKTVCIPLRTYYVDEAPTIGKSPDKTNPDYKENYEVM
TNLVSELRGKVSTILQGGGEKARQRHMSRGKLLPRERIMKLLDPESPFLELSQLAGYELY
KGEDVPAGGIITGIGRVSGVECMIVTNDPTVKGGSYYPITVKKHIRAQEIAQQNHLPCIY
LVDSGGANLPRQADVFPDRDHFGRIFYNQANMSALNIPQVAVVLGSCTAGGAYVPAMADE
SIIVKKQGTIFLGGPPLVKAATGEEVSAEDLGGADLHCSKSGVTDYYAQDDAHALHLARN
VIKNINYNKEPQVTIISPEEPLYSADELYGIVGGNLKKTFDIREVIARIVDCSRFDEFKA
LYGETLVTGFARLWGYPVGIIGNNGVLFSDSALKGTHFIELCCKRNIPLIFLQNITGFMV
GKDAEAGGIAKHGAKMVTAVACAKVPKFTVIIGGSYGAGNYGMCGRSYRGEMIQLNPYCV
KKDPDYVKNGLFFNEWTEEEEKALKDPVIKKYEIEGSPYFSSARLWDDGVIDPADTRNIL
GLSLSASLNAPRQNTTFGVFRM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgattaatatttgcaaatgtctccgaaatgcaaaagtgtcatgtagaaaaaatatattt
aatgaatatatcaaaacagtttgtatacctttacgaacatattatgtcgacgaggctcca
acaattggtaaaagtccggacaaaaccaaccctgactacaaggagaactatgaggtgatg
acaaacttggtcagtgaacttcgtggaaaagtttcgacaattctccaaggtggtggtgag
aaggcaagacaaagacatatgtcaaggggcaaacttttaccaagggagagaattatgaaa
ttactagatccagagtcaccttttttagaactgagccagctggctggctatgaactgtac
aagggtgaagatgttccagctggcggtataataacgggaataggaagagtttcaggtgta
gaatgtatgatagtaaccaacgatccaactgtgaaaggcgggtcatattatccaatcaca
gtgaagaaacacatcagagcgcaggaaatagctcaacaaaatcatctgccatgtatttat
cttgtcgactcaggaggagccaatctgccccgtcaagcagacgtgtttccagatcgggac
cattttggacgtatattctacaaccaggcaaacatgtcggcattaaacatacctcaggta
gcagttgtgctgggatcatgtacggcagggggcgcttatgtgccggcaatggctgatgaa
agtattattgtcaaaaaacagggtactatctttctaggtggacctcctttggttaaggca
gctacaggtgaggaggtgtcagcagaagatctaggaggagctgaccttcactgtagtaaa
tctggtgtgacggattattatgcacaagatgatgcccatgctttacatctagctagaaat
gtcatcaaaaatattaattataacaaagagcctcaggtaaccattatttcaccagaagag
ccactttattcggcagatgagctgtatggcattgttgggggaaatttaaaaaaaacattt
gatatccgtgaagttatagctcggatagttgattgcagtaggtttgatgagtttaaagct
ttatacggggaaacactagtcactggatttgcaaggttatggggttatcccgttggcatt
ataggtaacaatggtgtgctcttctcagattcggcactgaagggaacgcacttcatagag
ttgtgttgtaaaagaaatattcctttgatatttctacagaatattacgggttttatggtg
ggcaaagatgctgaagcaggtggtatagccaaacatggagctaaaatggtcaccgctgtt
gcgtgtgccaaagttccaaaatttactgtgataattggagggtcatatggggcaggcaac
tatggaatgtgtggacgttcatacaggggtgaaatgatacagttaaacccatattgtgtt
aaaaaggacccagattatgtgaaaaatgggttatttttcaatgaatggactgaggaggaa
gagaaagctttgaaagatcctgtgataaaaaaatatgagattgaaggaagtccgtatttc
tcaagtgccaggttatgggatgatggagtaatagatccagcggacacgaggaatattctt
ggactttcattaagtgcttctcttaacgcacccaggcaaaatacaacatttggtgttttc
cggatgtga
DBGET
integrated database retrieval system
