Ruditapes philippinarum (Manila clam): 132726120
Help
Entry
132726120 CDS
T09557
Name
(RefSeq) cell adhesion molecule DSCAM-like
KO
K06767
Down syndrome cell adhesion molecule
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rphi04515
]
132726120
Cell adhesion molecules [BR:
rphi04515
]
Immunoglobulin superfamily
DSCAM family
132726120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
V-set_CD47
Pur_ac_phosph_N
Ig_5
C1-set
Adeno_E3_CR1
TM_ErbB1
CD34_antigen
M11L
Motif
Other DBs
NCBI-GeneID:
132726120
NCBI-ProteinID:
XP_060567374
LinkDB
All DBs
Position
Unknown
AA seq
1659 aa
AA seq
DB search
MFGLIVGIIMVYAHHLAAEIVFDAVPTNAAVVFGQDLFLSCSARNTTSNSQNGLTIRWNL
NEVQVSSKTSVFYNGTLLVPLVTKEDLGNYTCAVYDDSGDLVLESPSGKVFHAFIKMFEV
SPIPANVLEDEEVTFDCITGESAPPPEIYWERNGEPFTGGKQYSATYGGHSEQSLVKQYS
MKLILTAKPHLDGTYNCVARNPVLGIAIRSRIVLMQTAEIETAPYVMDGHLQTNVTTALN
QPMLLDCPVMGKPKVDIAWFRNGEAVSQIGDFFILMNGSLHRPISQLTDGGEYICEGTNT
LGVARAPSISVTIARIDLMFVEQPSNLFVIAGLPATLKCAPPYSVPSAAVTWYKDDILFV
PRTGDYAVQVVKTVDGYWNIQFKNIQKQDEGEYFCVATNSYAIPASRTSVSAKISVGGAP
IFVEPPVGLTIEKGKLAKLTCYVQGDPFPEITWLFENKVLEVSTTVSFRNGKQELWIGNM
NKGNEGTYTCKAFNRFSTIQTRVYVKVLVPPVVLQSVGHTVASKGDAVVIPCGIYSDPDP
TITWYKDSAAIAMGDRFTQLYTGLYITSVIVEDSGTYLCHASNMAGSVENEGTLEVLVRP
YFIEKPSDQVVNIGKNVTLTCIVNGFPKPEITWHFNGSSMFPQNTLLSLNHEELMLMNVS
WMHIGTYTCVAKNEEGVKKAEATVAVRVPPKVERIDGVPLLYLGENIQLTCHITGIPAPK
IEWYFNRQLVAPSKDGRISIPEPTLLNVKFATEDDEGIYSCKAINAAGVSQKDIDVYIIT
RPSPPVLINAETVSATSIMLTWSIKQRQPQTPIDHIFVSYRKHIQSSSPYMKLEVNSDVT
EYLVDDLDPASHYMFLLSAMNSAGTSDISNILSALTYDAGPSKPRNLQVMEVTAYNISVG
WEIPETTNGQIKKYQINYRKKNDLQDSTIIIGSDNHANHDYIIPDLSPYTWYTIQVRAAT
IEGDQVLWGNWTNPVETRTSQTAPTGQPSEVKAQALSPFTIQVTWEAVPQQKQNGPIKRY
YVKYWLLSNLTKPEGEEVIDSLDLQANISGLEPWTLYMVKVIPENAGGEGEASEPVTVRT
SPTAPGSAPLNLTVEVQSASSILVKWQPPSPEDWNSDISGFIVQYWRLPDGDISQLISNG
ILDLAAIIRNLDPYTDYGVHVGAFTNQVTDGIGPNTDNVTIKTDQSYPGSVVDLDFSATP
TSLRLSWKPPAVTNGIITKYLILYHSIGPVVVTTPFPPSQPIIEEHIDEILNSTSLLDDI
FRTFDDSLTEDIFQPLAALCDIILHNETLNNQVENITDIIQSEEVLQIKNISSNVVFDWM
ENEQIRLGELCLNLRNFVIHLLSDKHISIYVLNMTTSKTSVTISDLESGHIYNISVSAAT
VAGFGPYTTIEAITANAPPTPRTTKRPVPPVTRPSVTNRPLMKTDEETEPLNLPVIIGGG
VSGFLLLVIIILVGGCLCMRRRSQSDEKSKVIAEETLEDTNANNMYGQLDRPSNTPAIAV
AAEDGTDSVDIYGDEVRFQSPQRHQYNQSANRSYMTEESTTTVSTHGRRGNESYLGLENP
SYSGLAAPNTVKSNPAYYEEPSSSDLESISVSMAFSSEDTLYAQAGESTLKRKNKMKSSD
AAAIARLRNSALPPGLSQTDKSSLINNEVEVIYNERTAL
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtctaatagttggtattataatggtgtatgcccatcatctagctgcagaaata
gtgtttgatgctgtaccaacaaacgcagccgttgttttcggacaggatctattcctttca
tgctcagcaagaaacacaacatccaactctcagaatggtttaacaatacgatggaatcta
aatgaagttcaagtcagctcaaaaacgtctgttttctacaatggtacattacttgtaccc
ttggtaaccaaagaagaccttggcaactacacttgtgctgtttatgacgattctggtgac
ttggttttagaatctccatcagggaaggtgttccatgcatttataaagatgtttgaggtc
agtccaataccagcgaatgttttagaagatgaagaggtgacatttgactgtatcacagga
gagagtgcacctccacctgaaatttactgggagagaaacggggaaccattcactggtggg
aaacagtatagtgccacatatggtggacatagtgaacagtcactggtaaagcaatattcg
atgaaacttatactgacagctaagccacatcttgatggtacatataattgtgttgccagg
aatccagttcttggaatagctataagaagtcgcattgttctgatgcagacggcagaaata
gaaacagccccgtatgttatggacggtcatctacagactaatgttacaacagctctgaac
cagccaatgctcctagactgtcccgtcatgggtaaacctaaagttgatatagcctggttt
agaaatggagaagcagtcagccaaattggtgatttcttcatattgatgaatggttccctg
cacagaccaatttcacagctgacagatggaggggagtatatttgtgagggaaccaataca
cttggtgttgctcgtgctccaagtatatctgtcaccatagcaagaatagacttgatgttt
gtggagcagccaagcaaccttttcgtgatagctggtttgccagccactttaaaatgtgcg
ccaccatacagtgtaccgtctgctgcagtcacatggtacaaagatgatatcttatttgtg
ccaaggacaggagactatgcagtgcaagtagttaaaacagtggacggttactggaacatt
cagtttaagaatatacagaaacaggatgaaggagagtatttctgtgttgctacaaactcg
tatgccattcctgcgtcccgtacctcggtgtcggcaaaaataagtgtgggaggggcacca
atatttgtagaaccaccagtgggcctaaccatagagaaagggaaacttgccaagcttaca
tgttatgtacagggtgatcctttcccagagataacttggttgtttgaaaataaagttctt
gaagtgtcaacaactgtatcatttaggaatggtaagcaggagctttggataggaaatatg
aacaagggcaatgaagggacatacacctgcaaggctttcaacagatttagtacaatacag
acaagagtttatgtcaaagtcctcgtgccaccagttgtgttacagtcagttggtcacaca
gtagctagtaaaggagatgctgtagttataccttgtggaatatacagtgaccctgaccca
accatcacatggtataaagattcagctgctatagcaatgggtgatagatttactcaattg
tacacgggtctatatataacatctgttatagtagaggattctgggacgtatctgtgccat
gcctcaaatatggcaggatctgtagaaaatgagggcactcttgaagtgttggtgagacca
tattttatagagaaaccgtcagaccaggttgttaatataggtaaaaatgtgacactgact
tgtattgtgaatggctttccaaaaccagagattacgtggcactttaatggaagttcaatg
tttccacagaacactttattatcattgaaccatgaagaattaatgctgatgaatgtgagt
tggatgcacattggaacatatacctgtgtagctaaaaatgaggagggagtaaagaaagct
gaggcaactgtagctgtccgagttcctccaaaggttgaaaggattgatggagtgccgtta
ctttaccttggggagaatattcaactcacgtgccatataaccgggatccctgcacccaaa
atagaatggtactttaatagacaacttgtggccccgagcaaagatgggagaatctctata
ccagaaccaacgctccttaatgtgaaatttgcaaccgaagatgatgaaggtatatattca
tgtaaagctattaatgcagctggggtcagtcagaaggatatagatgtttatattataact
cgtccaagtccccctgtgttgatcaatgcagagactgtatcagctactagtatcatgtta
acatggtccattaaacaacgtcagccacaaactcctatcgatcacatctttgtctcatat
cgtaaacatatacagtcatcaagcccttacatgaaactagaagtaaactctgatgtaaca
gagtacttggtggatgatttggacccggcttcacactatatgtttcttttatcagccatg
aattctgcaggaaccagtgacatcagtaatatattgtcagctttaacttatgatgctggg
ccatctaaaccgagaaatcttcaagttatggaggtcacagcatataatataagtgttggt
tgggaaattccagaaacaacaaatggtcaaataaagaaataccagatcaattacagaaag
aaaaatgacctccaggattccactataattataggaagtgataatcacgctaaccatgac
tatattatacctgacctgtcaccttacacatggtacaccatacaggttagagccgctacc
atagagggggatcaggtcctctggggaaactggactaatccagttgaaactagaacttca
caaacagctcctacaggacaacctagtgaagtgaaggcccaggcattatctccctttaca
atacaagtgacatgggaggcagttccacagcagaaacagaatggaccaataaaacgttat
tatgtcaaatattggttgctaagcaacttgactaaacctgaaggtgaagaggtcattgat
tcacttgaccttcaggcaaacataagtggccttgaaccttggacattgtatatggtaaag
gttattccagaaaatgctggaggagaaggggaggcaagcgaaccagtcactgtaaggaca
tctcctacagctccaggttcagcacctttgaatttgacagttgaggtccagtcagcttca
tcgatcttggtcaaatggcagcccccttcacctgaagactggaacagtgatatatcagga
tttatagtacagtactggaggcttccagatggtgatatctcccagctgatatccaatggt
atacttgatctagctgctattattaggaatttggacccttacacagactatggtgtacat
gtaggggcatttacaaatcaagttactgatggtataggaccaaacacagacaatgttaca
ataaaaactgaccaatcttatcctggttctgttgttgaccttgacttttcagcaacacca
acaagtttgaggttgtcatggaaaccgccagccgtgacaaatggcatcatcactaaatac
ctcattttgtatcattccattggtcctgtagttgttaccacaccttttccaccatctcag
ccaatcattgaagagcacattgatgagatattaaatagcacaagtttattggatgatatt
tttagaacttttgatgattctttgacagaagatatatttcagcctctggctgccctctgt
gatattattctgcacaatgaaaccttaaataatcaagtggagaatataactgatatcatc
caatcagaggaagtgttacaaattaagaatatatcaagtaatgtagtgtttgattggatg
gaaaatgaacaaatcagacttggtgaattatgtttgaatcttagaaattttgtgatacat
ctattatcagataaacacatatcaatatatgtattaaacatgacaactagtaaaacatca
gttacaatatctgacctagaatcaggacacatctataacatatcagtatcagcagcaaca
gtggcagggttcggtccttataccaccatagaagctatcacagcaaatgctccgcctacc
cctaggacgacaaagcgtcctgtacctccggttactaggccatcggtaaccaaccgtcca
ttaatgaagacagatgaggaaacagaacctctcaatctaccagtgattatagggggtggg
gtatcaggcttcttactgctggtgattataatcctggttggtggatgcttgtgtatgagg
cggagatctcagtctgacgagaaatcaaaagtaatagcagaggaaactcttgaagataca
aatgcaaacaacatgtacggtcaattagatagacctagtaataccccagctatagcagtg
gcagcagaagatggaacagattctgtagatatctacggtgatgaggtcagatttcagtca
cctcaacgtcatcagtataaccagagtgcaaataggtcatacatgacagaagagagtact
actacagtgtcaactcatggtcgtcgtggcaatgaatcttatctaggtttagaaaatcca
tcttactctggactagcagctcctaacacagtaaagagtaatccagcatactatgaagag
ccatcatccagtgaccttgagtcaatctctgtcagcatggcattctcatcagaggatacc
ctctatgctcaggctggtgaaagtactctaaagaggaagaataaaatgaaaagttctgat
gcagctgctatagcaaggctcagaaacagtgcgctacctccaggcctctcacagacggac
aaatcctcgctgattaacaatgaggttgaggtgatatataatgaaagaactgcactgtga
DBGET
integrated database retrieval system
