Ruditapes philippinarum (Manila clam): 132726339
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Entry
132726339 CDS
T09557
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132726339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132726339
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
GTPase
132726339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
DO-GTPase2
AAA
MMR_HSR1
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
132726339
NCBI-ProteinID:
XP_060567637
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MDEQSDNKKAHRKKLSGPKAERKKSKQGPGIDQNLTAQQRNPRAFSIQHANKALKTVQRT
QDLKTKKQHIPVVDRTPLEPPPIIVGVVGPPKVGKTTLLKCVVKNFTKQRLTKIQGPVTV
VSGKQRRLTIIECNNDISAMIDIAKVADLVLLLVDASFGFEMETFEFLNICQVHGFPRIM
GVLTHLDSFKDSKKLRKTKKRLKHRFWTEVYQGAKLFYLSGMVNGEYQKTEVHNLCRFIS
VMKFRPLTWRTTHPYILADRMEDISDPETVRQFSKTDRNISLYGYLHGTHMKNNVNVHIP
GCGDFSIHDLQFLSDPCPTPEKQKKRSLSQKDRLIYAPMSGVGGIVYDKDAVYIDLGGSH
SHTDAQRDEDAPQPMNELVSSMMSLNNPLDKKMTTSEVSLFSGGIKSSEMIIDDDEDDDD
DDYSGGRQFETVETDGRVRRRAVFDTHVDKMKSNDDEFKDDDDDDSDDDDERDDDDNGGD
YDIDEDNDDISDDDDEDDDDDEEDSEEESDASKVKKKQIRKGNISEEPSLAFDDSDSDEG
EEDDQTVKKLKKSDNSDDEDDVDNDDSCNKCEKNQSVNRNNKNGSSLLVNSELKSVKKSK
LNNITNSKRIASMEAVQNIDDTLTSKTGNDKLTSKNKQEANTSRIDSDSSDEGDSSDSDI
ISFKPTREKSSPVKGTEVKPSKTEGDDKQKDTSDNVKGGKSLSQKLLTLSETDYFMLNAK
KKIEDSLEEKEPEKTVNNDVSDGDEVSEDEEDGSEMDDEDEEEDGSFRWKHDLASQAAAN
FRQRQAGRINYRKLIYGKDEEEAVGDEGGDDEDQDEIGGLFKVLKQKSEAQAVDRIAVNS
TDCSKCLKNTLIQLEVDKIQELIADCFVTGKWDENKDAEALLQKDDELYGDFEDLETGEM
HKGKKEDNDDDDNDSPDDDDDDDIGSDGERKKQPEELKKKKADMTAEERRAEKKRKLKEM
FDTQYDMKGDTEFYDNWKEELDQQAKMNRAVFEDMDDELRVQYEGFRPGMYVRVEIHGVP
SEFVTNFDPTYPVILGGLLSVENNVGYVQARLKKHRWHKKILKTKNPLIISLGWRRFQSI
PLYSIQDHNMRNRLLKYTPEHLHCNASFWGPITPQGTGLLAVESVANVTGMFNSALEVAK
FEGASVRTVSGVRGQIKKAAKHLKGI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaatcagacaacaaaaaagctcacaggaaaaagttgtcaggacctaaagct
gaaaggaagaagtccaagcaaggccctggaattgatcaaaacttgaccgctcagcagaga
aacccaagagctttttctatacagcatgccaacaaggcattgaaaactgttcaaaggaca
caagatttaaagacaaagaaacagcatataccagttgttgaccggaccccattagaacct
cccccgatcatagtcggtgtagtagggcctcctaaagttggtaaaactacattactgaaa
tgtgtggtgaaaaacttcactaaacaacgtcttactaaaatacaaggaccagtaacagtt
gtttcaggaaaacagagacgtttgacaattatagaatgtaataatgacattagtgctatg
attgatattgctaaagtggcggacttggtcttactgctggtggatgcaagttttggtttt
gagatggaaacgtttgaatttttaaacatctgtcaagttcatggatttccgagaattatg
ggagtgttgacacatctggactcgtttaaggacagtaagaagttgcggaagacaaagaag
aggcttaaacataggttctggacggaagtgtatcagggagcaaagttgttttacttgtct
ggtatggtaaatggagaataccaaaagacagaagttcacaatctgtgtaggtttatatct
gtgatgaaattccgacctttgacctggagaacaactcatccatatattctggctgacaga
atggaagatatatctgatcctgagacagtacgtcagtttagtaaaacagatcgcaacata
tctctgtacgggtacttgcacggcacacacatgaagaacaacgtcaatgttcacattccc
ggctgtggagatttctctatacatgatttacaattcttgtctgatccatgtccgacacca
gagaaacagaagaaacgatctctaagtcagaaagatagactgatttatgcaccaatgtct
ggtgttggtggtatcgtgtatgataaggatgccgtttatattgaccttggtggaagtcat
tcgcatacagatgctcagagggatgaagatgctccccaaccaatgaatgagcttgtttca
tcaatgatgtctcttaacaacccattggataagaaaatgacaacatcagaggtttcacta
ttttctggtggaattaaaagctcagaaatgatcattgatgatgatgaagatgatgatgat
gatgattatagtggtggaaggcagtttgaaactgtagagactgatggcagagtcaggaga
agagctgtgtttgatacacatgtagacaagatgaaatctaatgatgatgaatttaaagat
gatgatgatgatgacagtgatgatgatgatgaaagagatgatgatgacaatggtggagat
tatgatatagatgaagataatgatgatatcagtgatgatgatgatgaagatgatgatgat
gatgaagaagattctgaagaagagagtgatgctagtaaagtgaagaagaaacagattaga
aagggcaatatctctgaggaaccaagtcttgcctttgatgactctgattcagatgaagga
gaagaggatgatcaaactgtaaaaaagttgaaaaaatcagataattctgatgatgaagat
gatgttgataatgatgacagttgtaataagtgtgaaaaaaatcagagtgtaaatagaaac
aataaaaatggcagctctctattggttaatagtgaactgaaaagtgtaaagaaaagtaaa
ttgaataatataacaaattccaaaagaattgctagtatggaggcagtgcagaatattgat
gatactttgactagtaaaactggtaatgataaattgactagtaaaaataaacaggaagca
aatacaagtagaattgactctgatagttcagatgaaggtgattctagtgacagtgatatt
atatcttttaaacctactagagaaaaatcaagtcctgtaaaaggaacagaagttaaacca
agcaaaactgaaggagatgataaacagaaagatacatctgataatgtaaaaggtgggaaa
tcattatcacagaaactgctgacattgtccgagacagattactttatgttgaatgctaag
aagaagattgaggattcactggaggaaaaggaacctgagaaaactgtaaataatgatgtc
agtgatggagatgaagtgagtgaggatgaggaagatggatcagagatggacgatgaagat
gaggaggaagacggatcatttcgctggaagcatgatttggcatcccaagcagcagcaaac
ttcagacaaagacaagctggtagaattaactacagaaaacttatatatggcaaagatgag
gaggaagctgttggtgatgagggaggtgatgatgaagaccaggatgagattggagggctt
tttaaggtgttgaaacagaagagcgaggcacaggctgtcgacaggatagctgttaacagc
acagattgttctaaatgcttgaaaaatacactaatacagttagaagtggataagatacag
gaattgatagcagactgttttgttactggtaaatgggatgaaaataaagatgctgaggcg
ttgttgcaaaaagatgatgagttgtatggagactttgaagatcttgagacaggtgaaatg
cacaaaggaaagaaagaagacaatgatgatgatgataatgatagtcctgatgatgatgat
gatgatgatataggttctgatggggagagaaagaaacaaccagaagagttaaaaaagaaa
aaggcagacatgaccgcagaggagagacgtgcggagaagaaacgtaaactgaaggaaatg
tttgacacccagtatgatatgaagggagatacagaattctatgataattggaaagaagag
cttgatcaacaggccaaaatgaatcgtgcagtgtttgaggacatggatgatgagttgagg
gttcagtatgaaggcttcagaccaggcatgtatgtgagggtagagatccacggggtgccg
agtgagtttgtcaccaactttgatccaacatatcctgtcattcttggaggattgcttagt
gtagaaaacaatgttggatatgtgcaggcaagactgaaaaagcacagatggcataagaaa
atattaaagacgaaaaaccctttaattatctcgctaggttggcggagatttcagtctata
ccactatattctatacaagatcataatatgagaaatagattactgaaatacacacctgaa
catctacactgtaatgcttccttctggggtcctataaccccacagggtactggtttgtta
gctgtagaaagtgttgcaaatgttacaggtatgttcaattctgcacttgaagtagctaag
tttgagggagcaagtgttcgtactgtcagtggggtcagaggtcagatcaagaaagctgca
aaacacctgaagggcatttag
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