Ruditapes philippinarum (Manila clam): 132726678
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Entry
132726678 CDS
T09557
Name
(RefSeq) tubulin monoglutamylase TTLL4-like
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rphi03037
]
132726678
04812 Cytoskeleton proteins [BR:
rphi04812
]
132726678
Enzymes [BR:
rphi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
132726678
Cilium and associated proteins [BR:
rphi03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
132726678
Cytoskeleton proteins [BR:
rphi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
132726678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Glyco_transf_52
Motif
Other DBs
NCBI-GeneID:
132726678
NCBI-ProteinID:
XP_060568006
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MGDQGTGKLTASLEDLSLKKQLPLRQQAQKPMLKYSNNAIKPVQLFNHADLMSIRSNAEA
ARNAYSSLSNASTTSTMSTPFRSSIKPAPSPQMLLQPATGANGHQANSTSSGPVKTSPTK
GHSNPYARPLSAKDIVSDLQHQQKIKKTPSSTQTQSGPGSMYTSGGSGTPMFGFPVNAFM
RPQSALRKENSAQSTSTKSMSDSKNSINSQSSSAKSSVADGSPNKTGSKVSPKKVIPPTR
LERETDLSQTGLANSNSGSQTMKNQFGQAKPAASMSSERVKQSPEKANVVNNNTSSPSKV
TAASQTPNSAIAKMNDPSSGEGVKKVLNSKTEVSTQSKPIVYARPVSSLPRPGSAASSGT
PDSQTKVRNPSYTPTKPYHEVNNPSSKPPISAVTKVQQTTETVISVKADPPRGNTYKAPT
NITKMNDLKQSSANQSGSSSKESSASSGTIYYRKESKADVMIHEQRPPAVGAPARPLKGA
EKGSRTNLTSGSELDEGADDESEVPSGERMPGDGEASVEDDEDYDDYDDEDMVDDLDDDC
IGGSDGESDGYSFTSSSMSLMSRRSSSAHRLKARAFSATGSDIGSVSRPQTASPDRTVKP
PLIHSHFPNIPPVVTFVAEGDKVEQLPWDYRKFLKWRLSPITPNVVKHCLARSGFRITKR
NHDWLGCWGKHMKSPGFKALREYQKLNHFPGSFQIGRKDRLWRNLSKMQVHFGKKEFGFF
PQTYCLPMDAKLLKRAFEDGGPKQKWIIKPPASARGIGIKVINKITQVPKKRPVIVQRYL
GRPYLINDSKFDLRIYVYVSSYDPLRLYVFEDGLARFASTKYSNSMKHLANKFMHLTNYS
VNKKNADYQANADDTVCQGHKWSLKALWNYMKRQGVNTSAVWENMKDLIIKTIISSDGPV
NSLIKANCKSRYCVHELFGFDILLDESLKPWILEVNISPSLHSNSQLDINIKGHMIKDLF
NISGIRVPDKHDLVQHPPQTSGPPDLSMYVPPNNVCMDKRLFSQQLSPDERAKHAYYSQR
HQDEQVQQSILDILTPDDIRFLTESIDEDGRKGGFQRVFPTPTTHKYLKYFETPRYYNLL
LDQWVQRFNRMEQRGIALLQSYCEDGIHLEINTDSPNHQWNPPSATCHTFRENRLLSAPL
SKHKEMETLKTRGKLIICKSSPQKFGYTTPNLEDMLPAMSVQRPRSCLPRSCLPRPVSRN
NKRNTQMILYRRRIMLLSRVTVSPSTPVAGTI
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcaaggaacgggcaagttgacggcaagcctggaagatctctcgctgaagaag
cagcttccactacgtcaacaggcccagaaacccatgttaaaatacagcaacaatgccatc
aaaccagtacagttgtttaatcacgctgacttgatgtcaatacgcagcaatgccgaagcg
gcccgtaacgcatacagtagtctaagtaacgcttccacgaccagtaccatgtcaactcca
ttccgatccagtattaaaccagctcccagcccacaaatgttactgcaaccagcgacaggt
gcaaatggacatcaagccaattccacttcctctggcccagtcaaaacttcccctactaaa
gggcattcaaatccatatgcacgacctctaagtgccaaggacatcgtaagtgatcttcaa
caccagcagaagattaaaaagaccccaagctccactcagactcaatctgggcccggctct
atgtacacaagtggcgggtcgggaacccctatgtttggatttccagtgaatgcattcatg
agacctcaaagtgctttaaggaaggaaaattctgctcaaagtactagtaccaagtctatg
tccgattctaaaaacagcattaattcacaaagttctagtgcgaaatcgagtgtcgctgat
ggaagtccaaataagactggttccaaagtcagccctaaaaaggttattccgcccactaga
ctggaacgagagacagatttaagccagactggtttagcaaactctaattctggttcccag
accatgaaaaaccagtttgggcaagctaagccggctgcaagtatgagctctgaaagagtg
aaacagagccctgagaaagcaaatgttgttaataataatacatctagtccgtccaaagta
actgctgcttcacaaactcctaatagtgctattgctaaaatgaacgacccctcaagtggt
gagggtgtgaaaaaagtgttaaattctaaaactgaagtttcgacccaatctaagcctatt
gtttatgcaagacctgtgtcatcactgccaaggcctggttcggccgcatcatctggaaca
ccagactcccagaccaaggttcgaaatcctagctacacgccaaccaagccgtatcatgaa
gtaaataatccgtcctcgaaaccgccaatttcggctgtgacgaaagtgcagcagacgaca
gaaactgttataagtgttaaggctgatccacctaggggaaatacatacaaggctcctacg
aacattactaaaatgaacgatttgaaacaatccagtgcaaaccagagtggcagtagttca
aaagaatcgagtgctagctctggaacaatatattacaggaaggaatcaaaggcagatgtt
atgattcatgagcagcgacctccagcggtaggggcacctgcaagacctcttaaaggtgca
gagaaggggtcaaggacaaatttgacatcaggatcagagttggacgagggcgctgatgat
gagtcagaagttccgtcaggggagcgtatgcccggagacggcgaggcgagcgtcgaagac
gacgaggattatgatgactacgatgatgaagatatggtagatgatttagatgatgactgt
ataggaggatctgacggagaatctgacggatattccttcactagcagtagtatgtcacta
atgtcacgacgatcatcatctgctcatcgtctgaaggctcgcgcattcagtgcgacagga
agtgacataggatcggtcagtcgacctcagacagcctcgccggacaggacagtaaagcca
ccacttatccacagccattttcctaacattccgcctgtcgttacatttgttgccgagggg
gataaagttgaacagctgccttgggattacaggaagtttttaaagtggcgattgagtccg
atcactccgaatgtcgttaaacactgccttgctaggtctggatttagaataactaaacgt
aaccatgattggttaggctgctggggtaaacatatgaaatctccaggtttcaaagctctc
agggaataccagaagttaaaccatttcccaggatcatttcaaataggtcgtaaagatcgc
ctatggaggaacttgtccaagatgcaggtccattttggcaagaaagaatttgggtttttc
ccacagacctattgtcttccgatggatgctaaacttctgaaacgtgcatttgaagatggt
ggaccaaaacagaaatggattattaagcctcctgcatcggccagaggtattgggatcaaa
gtcatcaataaaatcactcaggtaccaaagaaacgtccagtcattgttcaaagatattta
ggtcggccttatttaatcaatgacagcaaatttgatctacgtatatacgtatatgtgagt
tcgtatgaccctctcagactgtacgtgtttgaagatggattagccagatttgcatctacg
aagtattccaactccatgaaacatctagccaacaagttcatgcatcttacaaactacagt
gtaaataaaaagaatgcagactaccaggctaatgctgatgatacagtgtgtcaaggtcat
aaatggagtttaaaagcattgtggaactacatgaaacgacagggtgtgaatacttcagca
gtttgggagaatatgaaagatctcataattaaaacaattatcagttcagacggaccggta
aacagtttgattaaggctaactgcaagagccgttattgtgtacatgagctgtttggcttt
gatattcttctggatgaaagcttgaagccatggattcttgaagttaacatatcaccaagt
ttacattccaactctcagcttgacatcaacataaaaggtcatatgatcaaggacctgttt
aacatttccggtatacgtgtaccggacaaacacgatctagtccaacatccgccacagacc
agcggaccaccagatctcagtatgtatgtcccgccaaacaatgtgtgcatggataaacgt
ttgttcagtcaacagttatcacctgacgagagggcaaaacatgcttattacagtcagagg
catcaagatgagcaagttcagcagtcaatacttgacatcctgacgcccgacgacatccgg
ttcctgactgagagtattgacgaggacggtcgtaaaggagggttccagcgagtgtttccc
acgccaaccactcacaaatatctgaaatatttcgaaactccaagatattataatcttctg
ctagaccagtgggtgcaaagattcaaccgaatggagcaaagaggaatagcattacttcag
tcatattgtgaggatggtattcatcttgaaattaatacagacagtccaaatcatcagtgg
aacccacctagtgcaacatgtcatacattccgggagaatcgtcttcttagtgcgccattg
tctaaacacaaggaaatggaaaccttgaaaactagaggaaaactcataatatgtaaatca
tcgccacaaaaatttggttacaccacaccaaatttagaggacatgttaccagctatgtcc
gtgcaaagaccgaggtcttgcctaccgaggtcttgcctaccgcggccggtttcgagaaac
aataaaagaaacacacaaatgatcttgtataggcggagaatcatgcttctgtcgagggtg
actgtcagtccgtctacccccgttgcaggaactatttag
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integrated database retrieval system
