Ruditapes philippinarum (Manila clam): 132726881
Help
Entry
132726881 CDS
T09557
Name
(RefSeq) retinoic acid receptor RXR-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132726881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132726881
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rphi03310
]
132726881
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
132726881
Nuclear receptors [BR:
rphi03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
132726881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
tRNA_bind_3
DUF6681
Motif
Other DBs
NCBI-GeneID:
132726881
NCBI-ProteinID:
XP_060568274
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MYKTMDDNAMESLESSVSSGPGMSMGMDMGGMGMTSPISSVGSMSPGMSSPDIKPDITSL
SVTSPPGSYFSYGMHQGMNSQSGSIHSPPLHSPSSSVQSPTMMSIGSPGSVGSPPNPHMP
HTTLSNKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDRNCMIDKRQRN
RCQYCRYMKCLSMGMKREALIDKSTSPAVNSAVQEERQRNKEKGESEAESTVNANSDMPV
EKILEAELAVEPKTDTYIDAQKDAVTNICQAADKQLFTLVEWAKRIPHFTELPLDDQVIL
LRAGWNELLIAAFSHRSISVKDGILLATGLHVHRSSAHQAGVGTIFDRVLTELVSKMREM
KMDKSELGCLRAIVLFNPDAKGLTSVQEVEQLREKVYASLEEYCKTRYVDEPGRFAKLLL
RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPSPAS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaacaatggatgacaatgccatggagtctttagaaagtagtgttagcagtggt
cccgggatgtcaatgggaatggacatgggtggtatggggatgacaagtcccatttcttct
gtcggttcaatgtcacccggaatgtcttcacctgatataaaacccgatattacgtcattg
tctgtaacatcgcctcccggatcctacttcagttacggaatgcatcaaggcatgaattca
caatctggttcaatacattctccaccattacactcgccatcatcgtcagtacagtctcct
acaatgatgtccattgggtcgcctggctctgttggttcaccaccaaatcctcacatgcct
catacaaccctgagtaacaaacacatatgtgcgatatgtggggacagagcttctggaaaa
cattacggtgtttatagttgtgaaggatgtaaaggattctttaagcgcacagtaaggaag
gacctgacctatgcttgcagggatgacagaaattgcatgattgacaaacgacaaagaaat
cgttgccagtactgtagatatatgaaatgtctttcaatgggcatgaaacgtgaagctttg
attgacaaatccaccagtcctgcagtgaattccgctgtgcaggaggagagacagagaaac
aaggagaagggggagagtgaagcagaaagcacagttaatgctaactctgacatgccagtt
gagaaaatccttgaagcagaactcgctgttgaacctaagactgatacttacattgacgct
cagaaagatgcagtgacaaacatatgccaggcagcagacaagcagttgtttacactggta
gaatgggcaaaacgcatacctcattttactgagctgccattggacgatcaagtcattcta
ctaagagcaggctggaatgagttattgattgctgcattttctcatcgttcgatctctgtg
aaagacggcatattgctagccacaggtcttcatgtacatagaagcagtgcacaccaggct
ggtgtaggtaccatatttgaccgagttctgacagagctggtgtccaaaatgagagagatg
aaaatggacaagtcggaattaggctgtttacgtgcgattgtactgtttaatccagatgct
aaaggactgacaagtgtacaggaagtggaacagttacgggagaaagtgtatgcgtcgctg
gaggagtactgtaaaacacgttacgtggacgaaccaggacgtttcgcaaagttgttactt
agattaccagctctaagaagcattggtctcaaatgcttagaacatttgtttttctttaaa
ctcattggcgatacaccaatcgacacgtttttaatggaaatgttggaaactccaagtccg
gcatcatga
DBGET
integrated database retrieval system
