Ruditapes philippinarum (Manila clam): 132727033
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Entry
132727033 CDS
T09557
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00061
Fatty acid biosynthesis
rphi00071
Fatty acid degradation
rphi01100
Metabolic pathways
rphi01212
Fatty acid metabolism
rphi04146
Peroxisome
Module
rphi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
132727033
00071 Fatty acid degradation
132727033
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
132727033
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rphi01004
]
132727033
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132727033
Enzymes [BR:
rphi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
132727033
Lipid biosynthesis proteins [BR:
rphi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
132727033
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of breast milk
132727033
Exosomal proteins of breast cancer cells
132727033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
132727033
NCBI-ProteinID:
XP_060568427
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MINMNNSHYRKFNKDDTHLSYLPLAHMYERIGQQCLTMEGAKIGFFRGDVKLLLDDLQTL
KPTVFFSVPRLMNRIYDKVMAGVKASKVKQFLFNWAISSKAKELKQYIIRRNSIWDKIVF
KKIQALFGGKVDIVITGSAPLEAEVLTFFRCALGCAFLEAYGQTETVAAVSMGIVGDWSA
GHVGPPLPYTYIKLFDAPEYNYYAKNNQGEVCAKGVTISSGYYKDPVKTAETIDKEGWLH
TGDIGQWLPNGTLKIIDRKKNLFKLSQGEYVAPEKVELVYSRSSFVAQAFVEGDSLQPYV
MAVIVPDEEVLISWANSQNLSDSFQELCKSESVKSMMLLDIQKTAREAGLKGFEITKDII
LRSELFSIENGLLTPTFKNKRPQLRSFFKNDITALYKKHSGGSG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgattaatatgaataactctcattacagaaaattcaataaagatgacactcatttgtct
taccttcctctagctcacatgtatgaacgtattggtcaacagtgtttgaccatggaggga
gctaagattggatttttccgtggggatgttaaacttttgttagatgatttgcagacgtta
aaaccaactgtcttcttctctgtacccagacttatgaacagaatctatgataaggtgatg
gcaggagttaaagccagtaaagtgaaacagtttctgtttaactgggcaatttcttccaag
gctaaggaactgaaacagtatataataagacgtaacagtatatgggacaagattgtgttt
aagaagatacaggcattgtttggtggtaaagttgatattgttatcacaggttctgcacca
ctagaagcagaagttttaactttctttagatgtgctcttggttgtgcgtttctagaagca
tacgggcaaacagaaactgtagcggcggtatcaatgggaatagttggggactggagcgca
ggacatgttggacctccattgccatacacctacatcaaactgtttgatgctcctgaatat
aattactacgctaaaaataaccaaggggaggtgtgtgctaaaggagtcactatctcaagt
ggatattataaagacccagtaaaaacagcagaaactattgataaggagggatggcttcat
acaggagatattggacaatggttacctaatggtacattaaaaattattgacaggaagaaa
aatctgttcaagttgtcacagggagagtatgtggccccagagaaagtagaacttgtttat
agccggagttcatttgtggctcaagcttttgtagaaggtgatagtcttcagccatatgta
atggcagtgattgtacctgatgaagaagttttaatctcatgggcaaattctcaaaatctt
tctgatagtttccaggaactgtgcaaaagtgagagtgttaaatcaatgatgctactggac
atacagaaaactgctagagaagctggtctcaaaggatttgaaattactaaagatatcatt
ttgcgatcagaactattttctattgaaaatggactgttaacacctacgtttaaaaacaag
cgcccacagctacgcagtttcttcaagaatgacataacagctctttacaagaaacatagt
ggtgggtcaggttaa
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