Ruditapes philippinarum (Manila clam): 132727172
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Entry
132727172 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 1-like
KO
K26273
protein strawberry notch
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132727172
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132727172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
Zn-C2H2_12
UBZ_FAAP20
ResIII
Motif
Other DBs
NCBI-GeneID:
132727172
NCBI-ProteinID:
XP_060568583
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MSNAVAEQMPGEPIAGSSTVTSESCEQIILNKHEDNPVVILDDDSSETTVDKLTSISETK
FVDSVIPHYPKSFVDVLHNGELEMTKMSPSSVSNENEAPDLSNRNKAPSNTLTMLAAELQ
KPASSKCSGPGSIAEAAHNAFLASQPGPHPLLQQIENISQIYGNQDVVMVNDKQLSAPVA
QGDEELGRLAQDGVNETISAEVFSGYRHREILPGCKPHPGDIVEAGPLAAITPPDNYYPL
DKSLPREIIQGGKLSSLQLEGVIQACQRHQMLLPNGQRAGFFIGDAAGVGKGRQISGVIL
DNFARGRTKSIWFTISADLIVDARRDLGDLGCYIKVIDGCQELDKHTRVLGLPADFREGV
VFSTYATLVSTVQSKGSSGRQSRLQQLVDWCGGEEFDGCLVFDECHKAKNFVPGKEQAST
KIALSVTSIQRMLPKARVLYCSATGVTDVKNMAFMERLGLWGEGAPYRNFEQFLVSVQKK
GLGMAEMLAMEMKSAGMYVSRGLSYKQAEFITVEASLTKEQVKMYDTAVHVWNELRKALE
SAILRTTNNNTRLWAQFWSCHQRFFKQLCLGMKVPSIVKEAHEAINDGCCIVIGLQTTGE
ASLESELDKGKGSVTGFMSLCREILTRFIDQYFPTRVDAPKEGEIKEDPWSVTAKNMLLN
FTKKIALPDSPLDEIIDKLGGPGNVAEMTGRRGRIVRPSATETPRYETRTADNDAYGAID
SLNVQERNMFMEGKKLVAIISDAASTGISLHADQRVANQRRRIHLTVELPWSADKAVQQL
GRSHRSNQSSGPLYKXLTTDLGGERLFAAAVARRHASLGALTKGDRRAATGADLTEFNFD
TSYGRNALRNMYSHICSKKMVPGLSLNVLTGGKYDFELFNRHMQVSLVLMGLVDIDMLRS
GPVLKDKDTGDVSKFLNRILGLSVEKQNMIFTYFTECMKLGIDNAKKEGRYNEGMLDITA
SSVEMVGKPKEIFKEFNKGHTSTRLVELNIDRGMSWEQTLTRADNHSQKQDGFYISRRDV
WGKKLFILATQKENSTHLFKIARPNTGLSFFEEEKTDLLQRYTKIDRADAEKGWKEQYET
TKSSCVHGSHCKNKDFCKVGSRCYSLHLLCGSIVTYMSILEGTLNRNATKLNLSKTESSI
RVVRVKLNDGERVVGIRYPQLLIPEVEKTLKEQRFIENAQQSQPQMSQYFPSSQGVYNGL
SQAIMMSQSINGLPSGTSGLFQGSQLSQNSNSTTAFQNGLSQSSSGLYQMPNTTAVNLND
SNSLDQNNLPNGSSSDTQKTVVQDVTPVNSKCLAKALKPPLTIKNFFKTSLTPKNESSET
SDCRNVGNKLDTVKNTKEISYETFLKRADVGETSSACSSMDLDSKSEEDTSSECKVTKVE
TEDTGSNSSSNSKMDSSRTCSSYFTTSSSKKRSLDYPSSSQPSKKPKQATLFSTLKKMKT
KKEEEENKSATCPICCKVFEKGISNADLNSHIDNCIIE
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgcggttgcagagcagatgccaggagagccaatagctggtagctcaactgta
acttctgagagttgtgaacagataatactaaacaaacatgaagataatccagtagtgatt
ttagatgatgattcttcagaaacaactgttgacaaattgacaagtatttcagaaaccaaa
tttgttgacagtgtgataccacattacccaaagtcttttgttgatgttcttcataatggt
gaattagaaatgacaaaaatgtcaccatcaagtgtgtccaatgagaatgaagcacctgat
ttatcaaatagaaacaaagcaccaagtaatacattgacaatgctagcggcagagttacag
aaaccagcaagttcaaagtgttctggtccagggagtattgcggaggcagcacataatgca
ttcctggccagtcaacctgggccacatccattattacaacagattgaaaacatctcacaa
atatatggtaatcaagatgtggtgatggtcaatgataaacagttatctgcccctgttgcc
cagggtgatgaagaattaggaagacttgctcaggatggtgtaaatgaaacaattagtgct
gaagtattctctgggtacagacatagagaaattttaccagggtgtaagccccatcctgga
gatattgtagaggcagggccacttgctgcaataaccccaccagataactactacccactg
gataagtccttgccaagggagataattcaaggtggaaaactgagtagtcttcaattagaa
ggtgttatacaggcatgtcagaggcatcagatgttgttacctaatggtcagagagctggt
ttctttattggtgatgctgctggtgtaggtaaaggtagacagatttctggagttattttg
gacaattttgccagaggaagaacaaagagtatttggtttacaatatcagctgacttgatt
gtagatgcaagaagagatctgggtgaccttggttgttacattaaggtgattgatggatgc
caagagctggataaacatacaagggtgttgggtcttccagcagattttagagaaggtgtt
gtgttcagcacatatgccactcttgtatcaacagtacaaagtaaaggaagcagtggtaga
caaagtcgtttacaacaactggtagactggtgtggtggggaggagtttgatggctgcctt
gtgtttgatgaatgtcataaagcaaaaaactttgttccaggaaaagaacaggcaagcacc
aagatagcattatctgttaccagtatacagagaatgttgccaaaggctagagtattgtat
tgcagcgctactggagttacagatgttaaaaatatggcatttatggaaagacttggactg
tggggagaaggtgcaccatataggaactttgaacagtttttagtgtctgttcaaaagaaa
ggcttaggaatggcagagatgttagcaatggagatgaagtcagctggcatgtatgtatct
agaggtctgagttataaacaagcagagtttataactgtagaagcttcattgacaaaggaa
caggtcaaaatgtatgacacagcagtacatgtatggaatgagttacggaaagcgctagag
tcagccatattgaggacaacaaataacaacactcgcctctgggctcaattctggtcatgt
catcagagattcttcaaacagttatgtctaggtatgaaggtaccatctatagtaaaggaa
gctcatgaagctatcaatgatggatgttgtattgtaataggtctacaaactacaggagaa
gcatctttggagagtgagctggacaaaggtaaaggaagtgtgacaggatttatgtcactc
tgtcgtgaaatacttacacgttttatagaccagtactttcctacacgtgttgatgctccg
aaagaaggggaaattaaagaggatccatggagcgtgacagccaaaaacatgctgctaaat
tttaccaagaaaattgctctaccagacagtccccttgatgagattatagacaagctaggt
ggtccggggaatgttgccgagatgaccggacgtagaggtagaatcgtgagaccgtcggct
acagagacaccgaggtacgagactagaacagctgataatgatgcctacggtgctatagac
agtctgaatgtacaggagaggaatatgtttatggaagggaagaaacttgtagcaataata
tctgatgctgctagtacaggaatttctctgcatgctgatcaaagagtggctaaccagaga
agacgtattcacctaactgtggaattaccatggagtgctgataaagctgtacaacagtta
ggcagatctcatagatctaaccaatctagtggaccactttataagntgttgacaacagat
ctgggtggtgagagattatttgctgcagctgtggcaaggcgacatgcatcattaggggcg
ttaacaaagggagatcgtagagctgctactggagcagatttgacagagtttaactttgac
acatcttatggtcgtaatgccctccggaacatgtatagtcatatatgtagtaaaaagatg
gttcctggattgtcattaaatgtgctgactgggggcaaatatgattttgaattatttaac
agacatatgcaggttagcctggtgttgatgggactggtagatattgacatgttaagatca
gggcctgtactgaaagacaaggacactggggatgttagtaaatttctcaacaggatcctt
ggactaagtgtggaaaaacagaacatgatcttcacttacttcacagagtgtatgaaactt
ggtatagataatgcaaagaaagagggaaggtataatgaggggatgctggacataactgcc
tcatctgtagagatggtgggaaaacctaaagaaatcttcaaagagttcaacaaaggtcac
acatccaccagactagtggagttaaacattgaccgaggaatgagctgggaacaaacttta
acaagggcagataatcacagccagaaacaagatgggttttatatctccagacgagatgta
tggggcaagaaactatttattctagctacacagaaagagaactccacacatctgtttaaa
atagcaagaccaaacacagggttatcattctttgaagaggagaaaaccgatctgttgcag
agatatactaaaatagatagagctgatgcagagaaaggatggaaagaacagtatgaaact
acaaagtcaagttgtgtacatggctctcactgtaagaataaagacttttgtaaagttgga
agtcgttgctatagtctacatcttctatgtggtagtatagttacatacatgagtattctg
gagggtacactcaatcgcaatgcaaccaagctgaatctcagtaaaacagaatcatctatc
cgtgttgtaagagtaaagttaaacgatggtgaacgtgtagtaggaataagatatccacaa
ctactcataccagaggtggagaaaacactgaaagaacaacgatttatagagaatgctcaa
caatctcaacctcagatgtcacagtactttccatctagtcagggagtgtataatggactc
tcccaagcaatcatgatgtcacaaagcattaatggactaccctctggtaccagtggacta
ttccaaggaagtcagctatcccagaattccaacagtaccactgcatttcaaaatggacta
tcccagtcatcgagtggactttaccagatgccaaatacaactgcagtcaatttaaatgat
tccaattcattggaccaaaataatctgccaaatggatcaagttcggatactcaaaaaaca
gttgttcaggatgtcacaccagttaattctaaatgtttagcaaaggcgctaaaacctcca
ttgaccattaaaaacttttttaaaacctctttaactccgaaaaatgaaagcagtgaaacc
agcgattgtaggaatgtaggcaataaattagatacagtaaaaaatacaaaagaaataagt
tatgaaacttttctgaaaagagcagacgtaggtgaaacaagtagtgcatgttcttctatg
gacttggatagtaagtctgaagaagataccagtagtgaatgcaaggtaacgaaagttgaa
actgaagataccggtagtaattcgagctcaaattctaaaatggattcttcaagaacttgc
tcttcatattttacgaccagttcttcaaagaaaagaagcttggactatccatccagctct
cagcctagcaaaaagcccaaacaggctacgttgttttcaacattgaagaaaatgaagacg
aagaaagaggaggaagagaataaatctgcgacttgtccaatatgttgtaaagtttttgag
aagggtatttcaaatgcagatttgaattctcatatagataactgtatcatagagtga
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integrated database retrieval system
