Ruditapes philippinarum (Manila clam): 132727206
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Entry
132727206 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132727206
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132727206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132727206
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132727206
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132727206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
Macro
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-rbx1
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
132727206
NCBI-ProteinID:
XP_060568614
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
TGREENVLNAKAILESKDKEISWSKDVKNLEIYENGNLVIKVYEADILKVPTEGIVNAAN
EDLRHIGGIAGAIAKHAGKKLEEESRNIVKEEGKLKVSSVVCTSGGNLDFTYVLHAVGPR
WRDYQPFTEANVQKCADDLKLTYLQCLRMAESKQIKTLAIPTISSGIFKVPKDVCAVQYA
EAILEFGDRTDSLKELHVVDKDSDMIDIVQKIFYAMLTERKAAPNCLSKFVDTQVEQTKM
GIHDKETNAMKNIKNTGRDKSKVHINNESAVEQTTEDCVICMDSVTDEKRLNCGHIFCSE
CIDGYFRIKMVCPTCGKVCGKVTGDQPSGKMRIEKIHRYVTGFEGCKSISIMYQFENGKQ
GPDHPRPGDFYKGISRTAYLPDNKEGREICAMLKVAFERRLVFTIGTSRTTGKEGVITWN
DIHHKTDLTPFTQFGYPDATYLQRVREELTVKGVTIDDVDDDFIEQIKNNDFTQTIRL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
actggccgggaagaaaatgtgttgaatgctaaagcaatattggaatctaaagataaagaa
atatcgtggtccaaagatgtaaaaaacttagaaatttatgaaaatggtaacttagtgata
aaggtttatgaggccgacattttaaaagtgccgaccgaaggaatagtaaatgctgctaat
gaagatcttcggcatatcggaggcatagcgggggctattgctaagcacgctgggaaaaaa
ctcgaagaggaaagcaggaatattgtgaaagaggaaggcaaactcaaagtgtcttcggtc
gtgtgtacatcgggtgggaaccttgactttacatatgtgctgcatgctgttggtcctagg
tggagagactaccaaccatttacggaggcaaacgtacaaaaatgtgctgacgatttaaaa
cttacatatctacagtgcttgcggatggcagaaagtaaacaaataaaaacactcgctata
ccaactataagttcaggtatatttaaagttccgaaggatgtgtgtgcagtgcagtatgca
gaggcaattcttgaatttggtgacagaaccgactccttgaaagaactacatgtagtggat
aaagattcggacatgatagatattgttcaaaaaatattctatgctatgttaactgaaaga
aaagctgcgccgaattgtttaagtaagtttgttgacacacaagtggaacaaacaaagatg
gggatacacgataaagaaacaaatgcaatgaaaaacataaagaacactggtagggacaaa
tctaaggtacatatcaacaacgaatcagctgttgaacagacaaccgaggattgtgtcatt
tgtatggacagtgtaaccgatgagaaaagattaaactgcgggcatatattttgctctgaa
tgcatcgacggatactttcgtataaaaatggtttgtccaacatgtggaaaggtttgcggt
aaagtaaccggtgaccaaccatctggtaaaatgagaatcgagaaaatccaccgatatgta
acagggtttgaaggttgcaaaagcatttctataatgtatcagttcgaaaatggaaaacaa
gggccggatcaccctagacctggtgacttttacaaaggaatttctcgtacagcatattta
cctgacaacaaggagggcagggagatatgtgcaatgctgaaggttgcttttgagcgtcgt
cttgtttttacaataggaacgtctagaacaacgggaaaagaaggtgttatcacttggaat
gacatccatcataagacagaccttacaccttttacacagtttggatatcctgacgctaca
tatttacagagggtaagagaggagttgacggtaaaaggtgtgacaattgatgacgtggat
gacgatttcattgagcaaatcaaaaacaatgattttacacaaactattcgtttataa
DBGET
integrated database retrieval system
