Ruditapes philippinarum (Manila clam): 132727266
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Entry
132727266 CDS
T09557
Name
(RefSeq) F-box/WD repeat-containing protein 9-like
KO
K10265
F-box and WD-40 domain protein 9
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132727266
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132727266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
F-box-like
EIF3I
WDR55
Beta-prop_RIG_2nd
WD40_2
WD40_MABP1-WDR62_2nd
F-box_4
KNTC1_N
F-box
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
132727266
NCBI-ProteinID:
XP_060568677
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MSENNSVIDSGVDTDLIYKMELINDINKGFPENTNTNADNPENPDFDEDNLVLTDLPSEI
LIHIASYLESRTIGRSLYSACKKFYELFSSDRYWRTRISKRWTKQYPVFEREDFNWHKAC
MEREEVHKLWSNPDKHFNHFILKEGFFAAVDVVHLMKEGKFLAVGSRDRHFNIVDLTKYD
CAKEGQEKDLIVASETKAHKGWVWSMASYDDTLVTGSWDTFIRLWDFNNGAVTKSSEIKL
KTAILGLYYEPNFIAACGFDKRLYMLDPRSPDDCIKKHYHSQPVLSVVADDKYVITGSED
KSVAIYDRVAGKKYKTFKTESFVPSMSYQNNQLWMGDKAGKLNVMDTTDGLFDESLIKTF
DIGNERRLTGLVPTDGGIFTSSDSIIKIVEPSSDPAIINSLNVHSGEIARISHNNGVLAS
AGSDISVGVWIPKSCAYLS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaataattctgtgatagatagtggagtggacacagatctaatttacaagatg
gagttaataaatgatataaacaaaggttttcctgaaaatactaacaccaatgcggacaat
cctgaaaatccagattttgatgaagacaatttagttcttacagacttgccgtctgaaatt
ctgatccatatagcgtcgtaccttgaatccaggacaataggccgttccctgtatagtgct
tgcaaaaagttctatgaacttttctccagtgacaggtattggagaacgagaatctcgaaa
agatggaccaagcagtatccagtgtttgaaagagaagatttcaactggcataaagcatgt
atggagcgtgaggaagttcacaagctgtggtcaaacccagacaaacactttaaccatttt
atattaaaggaaggattttttgcagctgtggatgttgttcatttaatgaaggaagggaaa
tttttagcagttggttcaagagatcgtcattttaacattgtggatcttacaaaatatgat
tgtgcaaaagaggggcaagaaaaagatctcattgttgcctccgagacaaaagctcataag
ggttgggtgtggtcaatggcatcatatgatgacacacttgtcacaggctcatgggatact
ttcatacgtctgtgggacttcaacaatggtgctgtcacaaaaagttcggaaataaaattg
aaaacagctattcttggcctttattacgagccaaactttattgctgcctgtggctttgac
aagcgtttatacatgttagacccacgctcaccagatgattgcatcaagaaacattaccat
tcacaaccggttctgagtgtggtagcagacgacaaatacgttattacaggaagtgaggac
aaatctgtggctatatatgacagggtggcaggcaaaaaatataagacgtttaagactgag
agttttgtaccgagtatgagttaccagaataatcagttatggatgggagacaaggctggt
aaactaaatgtgatggatacaactgatggtctctttgacgagagtctgataaagacattt
gatattggcaatgaacgtcgacttactggactggttcccactgatggaggtatattcaca
tcctcggattcaatcatcaaaattgttgaacccagcagcgacccagcaataatcaactct
ctcaacgttcattccggtgaaattgccaggataagtcacaacaatggtgttcttgcaagt
gctggttccgacatatctgttggtgtttggattcctaagagttgtgcatacttatcatga
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