Ruditapes philippinarum (Manila clam): 132727322
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Entry
132727322 CDS
T09557
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132727322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132727322
03110 Chaperones and folding catalysts [BR:
rphi03110
]
132727322
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132727322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132727322
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
132727322
Messenger RNA biogenesis [BR:
rphi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
132727322
Chaperones and folding catalysts [BR:
rphi03110
]
Heat shock proteins
HSP60 / Chaperonin
132727322
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
132727322
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132727322
Exosomal proteins of other body fluids (saliva and urine)
132727322
Exosomal proteins of breast cancer cells
132727322
Exosomal proteins of colorectal cancer cells
132727322
Exosomal proteins of bladder cancer cells
132727322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
ATP_synt_eps_C
Motif
Other DBs
NCBI-GeneID:
132727322
NCBI-ProteinID:
XP_060568739
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MHRISPLVRSAISKKFTPALARCYAKDLKFGSDARALMLQGVDLLADAVAVTMGPKGRNV
ILEQSWGSPKITKDGVTVAKGIDLQDKYQNIGAKLVQDVANNTNEEAGDGTTSATVLARA
IAKEGFDKISKGANPIEIRKGVMMAVDAVVDELKKMSKQVTTPEEIAQVATISANGDKSI
GNLISDAMKKVGRDGVITVKDGKTLKDELETIEGMKFDRGYISPYFINSSKGAKCEFQDA
LILLSEKKISSIQSIIPALELANQARKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKA
PGFGDNRKNTLRDMAVASGGVVFGDEADMYKLEDIQMQDFGGIGEVTITKDDTLMMKGKG
DSADIEKRINQIREDIELSTSEYEKEKMNERLAKLSNGIAVLKIGGTSEVEVNEKKDRVN
DALNATKAAVEEGIVPGGGCALLRCLPALDNVQATNEDQKTGKIIVFKTVDV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgaatttcaccacttgtacgcagtgctatttctaagaaattcacaccagcgttg
gcaagatgctatgcaaaagatttgaaatttggctcagatgctcgggctttgatgcttcag
ggagtagatcttctagctgatgctgttgctgttaccatgggaccaaaaggtagaaatgtt
attctagagcaaagctggggaagtcctaagattacaaaagatggagttacagttgctaaa
ggcattgatttacaagataaatatcagaacattggtgcaaaactagttcaagatgtagca
aacaatacaaatgaagaagcaggagatgggaccacatccgcaactgtccttgcacgtgct
attgccaaagaaggctttgacaagataagcaaaggcgctaatccaattgaaattaggaaa
ggtgttatgatggctgtagatgcagttgttgatgaattgaaaaaaatgtccaaacaagtg
acaacacctgaggaaattgcacaggttgcaacaatctcagcaaatggagacaaatcaatt
ggtaatctaatctctgatgctatgaagaaagttggccgagatggtgtcatcacagttaag
gatgggaaaacattgaaagatgagctagagactattgaagggatgaagtttgacagagga
tatatttcaccatattttatcaattcctcaaagggagccaaatgtgagtttcaggatgcc
cttattcttctcagtgagaaaaagatctccagtattcagtcaattataccagctctagaa
cttgccaaccaggcccgtaaaccacttgtcattattgctgaagatgtggacggtgaagct
ttaagcacacttgtgctgaatagattgaaggttggacttcaagttgttgcagttaaggcc
cctggatttggtgacaatcgtaagaatactctacgtgacatggcagttgctagtggaggt
gtggtgtttggggatgaggcagatatgtataagttggaggatattcagatgcaagacttt
ggtggtattggtgaagttactatcactaaagatgatactttgatgatgaagggtaaggga
gattcagctgatattgagaaaagaataaatcagatcagggaagatattgaactatctaca
tctgaatacgagaaggaaaaaatgaatgaaagacttgcaaaattatccaatggtattgca
gtgttgaagattggaggtacaagtgaagttgaagtaaatgagaagaaggatcgtgttaat
gatgctctcaatgctactaaagcagctgtagaggaaggtattgtaccaggtggaggatgt
gctctccttagatgtttacctgctctagataatgtacaagctacaaatgaagatcaaaaa
acaggtaaaattattgtcttcaaaactgttgatgtttaa
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