Ruditapes philippinarum (Manila clam): 132727374
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Entry
132727374 CDS
T09557
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132727374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132727374
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
132727374
Prokaryotic type
Archaeal type
TFE
132727374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Cas12f1-like_TNB
CcmH
A24_N_bact
Zf-C2H2_ZNF451_C
C1_1
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
132727374
NCBI-ProteinID:
XP_060568799
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MDSDVLTEVPQSMKRLVRLVARGFYSIEHALVIDMLVRNPCMKEDDMLELLKFDRKQLRA
VINTLKIEKFIKVRMRVETDADGRTTRHNYYFISYIMFVNVVKYKLDHVRRKIEMEERCN
TSRASFRCDDCQKTFTDLEADQLFDFFSQTFKCTICQNEVIEDESAINKADARTLLAKFN
EQIQPLYDLLRECEDVKLAPELMEPEPTDIRSSQRPKNTKSTVSDKWSGDATKYTTQFGY
SDTSISVSMNEEQKKEKEAPKQQPIWMKKSTVDGVPTDTVNEIVAEDDVITRKDQDNRPD
VNREIENLLMIHEKKINMSVPAMIPGTGNTEESDSSDSEAETSQPTGTSTTVADIESEDE
EEDVMVTVAGTKIPYSDVTDEIVARMSLDEKAEYIKLGQEMYKDMYE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatgtcctaacagaggttccacagagcatgaaaaggcttgtgcgacttgta
gcacgtggattttattctattgaacatgcattagttatagacatgctggtgagaaacccg
tgcatgaaagaggatgatatgcttgaattgttaaaatttgacaggaaacagctacgtgct
gtcataaacacactgaaaattgaaaaatttataaaagttagaatgcgagtagaaacagat
gccgatggtcggactacaagacataattattattttataagttatatcatgtttgtgaat
gttgtgaaatataaactagaccatgtacggcggaaaatagaaatggaagagcggtgtaac
acaagtcgagcatcattcagatgtgatgactgtcagaaaacatttacagacctggaggct
gaccaactatttgacttcttttcacaaacattcaagtgtacaatatgccaaaatgaagtt
atagaggatgaaagtgcaataaacaaggcagatgctcggacattacttgccaagttcaat
gaacagattcaacctctgtatgatttgttacgagaatgtgaagatgttaaattagcacca
gaactcatggagccagaacccacagatatcagatcctctcaaagaccaaagaacacaaag
tcgactgtatcagacaaatggagtggagatgcgaccaaatatacgacacagtttggttac
tccgatacatctatcagtgtttctatgaatgaagagcagaagaaagagaaggaagcacct
aaacaacaacctatctggatgaagaagagcactgtagatggtgtacccacagatactgtt
aatgagattgttgcggaagatgatgtgataacaaggaaggaccaggataatcggccggat
gtgaaccgtgagatagagaatttactaatgatacacgaaaagaaaatcaacatgagtgta
ccagcaatgattcctgggactggaaacacagaggagagtgatagtagtgacagtgaagct
gaaacctcacaaccgacaggaacctcaactactgtggcagatatcgagagtgaagatgag
gaagaagatgtcatggtaacagtagcaggaactaaaataccttactctgatgtaacagat
gaaatagtagcacgaatgtcactcgatgagaaagctgaatatataaaacttggtcaggaa
atgtacaaggatatgtatgaatga
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