Ruditapes philippinarum (Manila clam): 132727477
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Entry
132727477 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5-like
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132727477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132727477
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132727477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Nse4_C
Motif
Other DBs
NCBI-GeneID:
132727477
NCBI-ProteinID:
XP_060568987
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MDFNVLLLVLAYSARCLCVFVSTPTSNATETHRLYTDLFVNQGYNSKILPYTNRSAKFGV
TMSFVLKTIIDLDEVTETLKTSSYMVIRWNDTFLKWNRTEYNFLFITYWPQNDVWKPDIV
LANSVRSYESLGHETLMVENFYNGTIKWFPQEMFETSCDIDMRYFPYDVQTCEIQFMSWS
YVSVNLRASEDEISLRYYDVNPLWEILETSVNYSKRAGVDVLIYELKLKRKPQHALLTLF
LPVLLLTILGLFVFAIPNGGDRSGYAVTLFLAFSVYLSIVDSVMSRNSEKISLFSIYLVV
QTVQSTIITILSVLLTKAELMETNSTVPRFLVFLVKISKVCCKKSDNVYTIESIETDTTS
DNKSDNNKETKTVKETTPCTWDMVVDAVDKIALIFFTVTFIVTTYEGALR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggactttaatgtactgctactggtgctagcatatagcgcaagatgtctgtgcgtgttt
gtatcaacaccaaccagcaacgctacagaaacacatcgtctttatacagatctcttcgtg
aatcagggttacaactctaagatactgccatatactaatcggtctgcaaagtttggtgtt
acaatgtcgtttgttcttaaaacgataattgatttagatgaagtaacagaaacattgaag
acatcatcttacatggtcatacgatggaacgatacattcttaaaatggaatagaacagaa
tacaactttttatttataacatactggcctcagaatgatgtttggaagccagacatagtt
ctggctaattcagttagatcatatgaaagtttaggacatgaaactttaatggttgaaaac
ttttataatggcactataaagtggttccctcaagagatgtttgaaacgtcctgcgatata
gacatgagatattttccatatgatgttcaaacttgtgagatacagtttatgtcttggagc
tacgttagcgtaaaccttagagcaagtgaagatgaaatatcattgaggtattacgatgta
aatcctttatgggaaatcttagaaacaagcgtaaactattcaaaaagagctggcgtggat
gtcttaatatatgaattaaagttgaagcgaaaaccccagcacgccctgttgacattattt
cttcctgttttgttgctaaccattttaggactttttgtgtttgctatacctaacgggggt
gatagatcaggatatgcagttacactgttcctagctttctccgtctacttaagtattgta
gattctgttatgtcgcggaattccgagaagatatcactgttttcgatatatttggttgtt
caaactgtccagtcaaccatcatcacaattttatctgtacttttaacaaaagcggaatta
atggaaacgaattccactgttccacgttttctggtgtttctagttaaaattagcaaagta
tgttgtaagaaatctgacaacgtctatacaattgaaagcattgaaacagatacaacttcg
gataacaagagcgataacaataaggagacgaaaactgtcaaggaaacaacaccttgtact
tgggacatggttgtagacgctgttgataaaatagcattaatattcttcactgtcactttt
attgtaacaacctatgaaggtgcattacgatag
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