Ruditapes philippinarum (Manila clam): 132727612
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Entry
132727612 CDS
T09557
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132727612
03041 Spliceosome [BR:
rphi03041
]
132727612
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
132727612
Spliceosome [BR:
rphi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132727612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_KHD4_2nd
KH_PNO1_2nd
KH_Vigilin
KH_DEAH11_2nd
KH_PARP10_1st
Motif
Other DBs
NCBI-GeneID:
132727612
NCBI-ProteinID:
XP_060569153
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDPQAAFADAVARARQIAAKINQPGQCGAGDGISPGKRPLDADPNNFDEPESKRSPFLQD
PAGGYPGLNQPRNTEAAQAAAQAAARINQQLGVSSPNSSMMQQQNDQMNLGGGMVITEEY
KVPDRMVGLIIGKGGEQITRLQAETSCKIQIAPECDGYDSNGMPERSTTLTGSPQAIGKV
KDEINKIIQRAQGDQGGFGDNSGNIEISIPGNKVGLIIGKGGETIKQLQEKTGVKMVMIQ
DSNVPTAFDKPLRITGDQMKCQRAKEMVMELLASKDNDMVGFDMGGGFPNGGGMGGFGGG
GGRGGGLDIPVPRAAVGIVIGKGGEMIKKIQQDTGAKVQFKQDDGQSEDRVCCITGPPDK
VNCAQEMIQDLLNNSNYGGGMGRGGPGFRGGRGGGRGGFNQGPGRGMGGPGGFDGGNFQD
QTTFAVPADKCGLVIGKGGETIKNINSSSGAHVELQRHPGPNPNEKVFNIRGEPSQIQHA
IQMICEKAGLPYDGPSGDMFPGPGGPGGPGGPGGPGGPPQGGPGGPYGGPGPQGPGGFEQ
YGGPQGGPGPNQPGFGGAPQGWGAQPGYNQQFPGQGQQPGAPAGGDPSVDKPQDPNAAAW
AAYYAQYYAQYGQQGQQYGQQPQQPQQPMPQSQQQPSINPQTGQPDYSQAWAEYYRQQGM
FQQANAILAQHQQQQGGGGQTPGAQPPQQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacccacaagctgcctttgctgacgctgttgcccgtgctagacagatcgctgctaaa
ataaatcaaccaggccagtgtggtgcaggggatggtatatcaccaggtaaaagaccatta
gacgctgatccaaacaattttgacgaaccagaatcaaagaggagccctttcttgcaggac
cccgcaggaggatatccaggactaaatcaaccaagaaacacagaagcagcccaagcagca
gctcaggccgcagcaagaattaatcaacaactaggggtctcatcaccaaacagcagtatg
atgcaacaacagaatgatcagatgaacctcggtggtggtatggtcatcacagaggagtat
aaagtaccagacagaatggtcggacttattattggtaaaggtggtgaacaaatcacaagg
ttgcaagcagagaccagttgtaaaatacagattgcaccagaatgtgacggctatgacagc
aacggtatgcctgaaagatcaacaactttaacaggatccccacaagctattggtaaagtg
aaagatgaaataaacaagatcattcagagggcgcaaggagaccagggaggatttggtgat
aattcagggaacatcgagatctccatacctggaaacaaagttggtctcattattggtaaa
ggtggagagactattaaacaattacaggagaaaacaggagttaaaatggtgatgatccag
gacagtaacgtcccaacagcgtttgataaacctttgagaattaccggtgaccagatgaaa
tgtcagagggcaaaagaaatggttatggagttgttggcctctaaagacaatgacatggta
ggatttgatatgggtggtggctttcctaatggtggtggtatgggaggatttggtggtggt
ggtggtagaggaggtgggctggacatccctgtacctcgtgcagctgttggtatagttatt
ggtaaaggtggagagatgattaagaagatacagcaagacacaggtgcaaaggttcagttt
aagcaagatgatggtcagtcagaggatagagtgtgttgtatcacaggtccacctgacaag
gtcaattgtgctcaggaaatgatccaagatcttctaaataactcaaattatggtggaggt
atgggtcgtggaggtcctggattccgaggtggccgtggtggaggcagaggaggattcaac
cagggaccaggtcgtggcatgggtggaccaggcgggtttgatggtggaaacttccaagat
cagacaacgtttgctgtaccagctgacaagtgtggattagtcattggaaaaggtggtgaa
accataaagaatatcaacagttcatcaggtgcccatgtagagttacagagacatcctggc
ccgaaccctaatgagaaggtgtttaacatccgtggtgagccaagccagatccagcatgct
atacaaatgatctgtgaaaaagcaggccttccttatgatggtcccagtggagacatgttt
ccaggcccaggtggtcctgggggtccaggtggccccgggggtcccggaggacctcctcag
ggtggacccggtggcccgtatggtggcccaggtccacagggaccaggtgggtttgaacag
tatggaggtccacagggaggtccaggaccaaaccaacctgggtttggaggagcaccacaa
ggatggggagctcagcctggttataatcaacagttcccaggtcaaggtcaacagccagga
gccccagcaggtggtgaccctagtgtagataaaccacaggaccctaatgctgcagcttgg
gctgcctattatgcccagtactacgctcagtacggacagcagggacaacagtatggccag
caaccacagcagccacaacaacccatgccccagtcacaacagcaaccaagtattaaccca
cagacaggacaaccagattattcccaagcttgggcggaatattaccgccaacaaggaatg
tttcaacaagccaatgctatactagcccagcaccagcaacaacagggtggcggcggacaa
accccaggggcacaacctccccaacagtaa
DBGET
integrated database retrieval system
