Ruditapes philippinarum (Manila clam): 132727695
Help
Entry
132727695 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132727695
04121 Ubiquitin system [BR:
rphi04121
]
132727695
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132727695
Membrane trafficking [BR:
rphi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
132727695
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132727695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
HypA
DUF7129
zf-Nse
zf-RING_Vps41
zf-RING_4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
132727695
NCBI-ProteinID:
XP_060569245
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MAEAAVENPDQTANNRFYCHQCSIEIEPKLPDFTCPECDNGFIEEISEGANTASGTSSST
PQQQPVPDPAARFAELWGRAFLESFSNHTAERDEGVAWARDRDSDDDEQEGSSRRQHRAF
QPSRVSFRRARPIRNQYLQGLFQYFTDRLDNELGAGGGGSGGFTMQGIPVNILPGIVPLH
SNPEDYAWGTGGLDAIITQLLNQLEGSGAPPAQKEKIDSLPVVSITQTQVDNVLQCSVCM
DDFSINEEVNKLPCDHHYHKDCIVTWLKMHGTCPVCRKDLSGEDTSLKDNITPILDDDDD
SPINNDPSNGMT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagctgtcgaaaatccagatcaaactgcaaacaatcgattttattgtcac
caatgctcaatagaaatagaaccaaagcttccagattttacgtgtccagaatgtgacaat
ggttttatagaagaaatatcagagggtgcaaacacagcatctggtacaagtagtagtaca
ccacagcaacagcctgttcctgatcctgcagcaagatttgcagagctatggggtcgagca
tttttagaaagttttagcaatcatacagcagagcgtgatgaaggtgtagcctgggctcgc
gaccgtgactctgatgatgatgaacaagaaggctcctcccggcggcaacacagagctttc
caaccatcacgtgtctcatttagaagagcacgaccaataagaaaccaatatttacaaggg
ttatttcagtactttacagatagattagacaatgaattaggtgccgggggtgggggttct
gggggtttcaccatgcaaggaattccagtgaacatactacctggtatagtacctctacat
agtaaccctgaagattatgcctggggaactggtggacttgatgctataattactcaactt
ttaaatcaattagagggatctggtgccccgccagcgcaaaaagaaaagattgacagttta
cctgtagtatctataacacagacacaagttgataatgtactacaatgttctgtatgtatg
gatgattttagtataaatgaagaagttaacaaactcccctgtgatcaccactaccacaaa
gactgcattgtcacatggttaaaaatgcatggaacatgtcctgtttgtagaaaagattta
agtggtgaggacacttctctcaaagacaatataacaccaatattagatgatgatgatgat
tcacccatcaataatgatccatctaacggaatgacataa
DBGET
integrated database retrieval system
