Ruditapes philippinarum (Manila clam): 132727792
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Entry
132727792 CDS
T09557
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00512
Mucin type O-glycan biosynthesis
rphi00514
Other types of O-glycan biosynthesis
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
132727792
00514 Other types of O-glycan biosynthesis
132727792
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132727792
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
132727792
Glycosyltransferases [BR:
rphi01003
]
Glycan extension
Type 3 chain
132727792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
132727792
NCBI-ProteinID:
XP_060569360
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MLCVFGLIYRYSRKNFDDGVTQMAPGIRRYIDQISSIHENSPDKVQTKNTRVLCLILTSY
ITFRSRVFAVNATWARRCDKQFYVLKTEKKAPDIINTPFGETRNNIVHKIKFALSYIYEN
HIDDFDWLIKADDDTYVIMENLKFLLRNLDGHKPAYLGFHFDKFVQNGYMSGGAGYVISN
RALRNLVELGFYPEKCPVIPNKEDPENSEDVEIGRCLNKTGVPVINSLDDEGKERFHHYP
IQKHLFGSVPRFVFEWAKNPHTEGMACCSKYSISFHYMDPASMLIVDHLLYRTSVFGLER
VDSKIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgttatgtgtttttggattaatttaccgatacagcagaaagaatttcgacgatggagta
acacagatggcgccaggaattcgacgatatattgaccaaatatcttcaatacatgagaat
tcaccagataaagtacagacaaagaatacgcgtgtgctttgtttgatattgacgtcatac
atcacgttcaggtcacgtgtttttgctgtaaatgcaacatgggccaggcgatgtgacaaa
cagttttatgtgctcaaaacagaaaagaaagctcctgatattatcaacaccccttttggg
gaaaccagaaacaatatagtgcataaaataaaatttgctttaagttacatttatgaaaac
catattgacgattttgattggcttattaaagctgacgacgatacgtacgtcattatggaa
aatttgaaatttttgctacgaaatcttgatggtcataagccagcatatcttggtttccat
tttgacaaattcgtacagaatggatatatgagtggtggtgcaggttacgtcatcagcaat
cgtgctcttcgtaatttggtggagttgggattttatccggaaaaatgtccggttattcca
aataaggaagatcctgaaaatagcgaagatgtagagataggcaggtgtctgaacaaaaca
ggagtgcctgtaataaactctttggatgatgaagggaaagaaagattccatcattatcct
attcaaaaacatttgtttggttctgttcctagatttgtattcgaatgggcgaaaaatccg
cacacagagggcatggcctgctgtagtaagtactctatcagctttcactacatggatccg
gcctccatgctgatagttgatcaccttctatacagaacatccgtattcgggttagaaagg
gtggattcaaaaatttcatga
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