Ruditapes philippinarum (Manila clam): 132727832 Help Entry 132727832         CDS       T09557                                  Name (RefSeq) deubiquitinase MYSM1-like   KO K11865   histone H2A deubiquitinase [EC:3.4.19.-] Organism rphi  Ruditapes philippinarum (Manila clam) Brite KEGG Orthology (KO) [BR:rphi00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:rphi01002]     132727832   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rphi04121]     132727832 Peptidases and inhibitors [BR:rphi01002]  Metallo peptidases   Family M67    132727832 Ubiquitin system [BR:rphi04121]  Deubiquitinating enzyme (DUB)   Ubiquitin-specific proteases (UBPs)    JAMM     132727832 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM JAB Myb_DNA-binding Prok-JAB Myb_DNA-bind_7 Myb_DNA-bind_6 Motif Other DBs NCBI-GeneID:  132727832 NCBI-ProteinID:  XP_060569402 LinkDB All DBs Position Unknown AA seq 946 aa AA seqDB search MAEEGEIDVLGDFDLKLEVDSNMYDSNELPSKSANLLPEYTDPPWMLEQGWTLDNSCMDE KSKATIEKMLLEEQYYISGKTGRGKQQLAMSVGVGLGKKKGEQKKIVWTKEEKDMFHKGM EIYGRSWTKIAELIPTRTSTQIKNFAHQLFRTLSKDKEVSPPKSEASTSSTSTSSSPVTC SQDPLTLTIETVTTAMPTVPNLEKCILPRRGRIPSKEKRVMKGKSAKQKNLVSKSSSNKL TFSQNAKKVARINQLKCKRKSCDKKNGLNKHTEHVTSHSTGQLTSDIVLDKKLTITPSLI ENLDGFCAVADIIGGENDEEKNVANESDDDIHIDIENDDTDVNPLLIGRSTSPNSVYEKL LNEANFNDSNQVNENTDNIYTQSGQIMTKTEGKKIDKETFLEWKTCESQAKISGEDIPDI DVQAKVTETIGNNTEQNEELIPVKNDIVVNENESSSVTLEDRSFLKKEDTVKQIDTQKVL VNALVRDDGEVVHFPVPVTEISLQPKMITEQEKSVLKEFFDNRPSKTPERYLKIRNYIIE SWKKCQPSYLNKTSVRPGLKNCGDVNSIGRVHAYLECIGAINFGCEQAAYKHPRSIFSLV GREKLSKDSTFEVNSAKLEAMRPRKRKVKDAFGFWIDEKDLEGTTFEHGILIESQPKETK PKQIKTAYDPFKLIPCLSFDDENPAPFLVEIHCSALIVMDIHSHISKTEVIGMLGGKFCA EQGKLIITMATPCNSISTGMQCEMDPVSQNQASEEIRGSGMEVVGWYHSHPTFAPNPSVR DIETQLKFQNWFSKGGCNFVGVIVSPYNMRKTGMCSEVNCLTISNEIQPQLQCNIPYKFS YTTKLCNMSEVNHIVLTAQDLATSYSNYQNKVDLTSIYNSSRGVSCLEKMIESLKSYCIE PETCQLIESVRKAFTPVVPAHHNIHQDDTCNSFSQSENPDSSSNIS NT seq 2841 nt NT seq  +upstreamnt  +downstreamnt atggcggaagaaggcgaaattgatgttcttggagattttgatttaaaacttgaggtagac agtaacatgtatgacagtaatgaactaccatcaaagagtgctaacttactaccggaatac acagacccaccttggatgctggaacaaggctggactttagacaatagttgtatggatgaa aaatcaaaagctaccattgaaaaaatgctgcttgaagaacaatattatataagtggtaag acggggagaggtaaacaacagttggctatgtctgttggtgttggactgggaaagaagaaa ggagaacagaaaaagattgtctggacaaaggaggaaaaagacatgttccataaaggaatg gaaatatatggtagaagctggacaaagatagcagagcttataccaacacggacaagcact cagattaaaaactttgctcatcagttgttcagaacattaagtaaagacaaggaagtttcg ccacctaaatctgaagcatcaacttcatcaacttcaaccagtagctctccagtgacttgt agccaggatccactcactctaactatagaaacagtaactacggcaatgccaacagttcca aatctagaaaaatgtattctacccagacgtgggcggataccatcaaaagaaaaacgtgta atgaaaggtaaatcagccaaacaaaaaaaccttgtatcaaaaagctccagtaacaagtta actttttcccagaatgctaagaaagttgcacgaatcaaccaattaaaatgcaaaagaaaa tcatgtgataagaaaaatggtttgaataagcatacagagcatgttacaagtcatagtact ggtcagctgacatcagatattgtgctggacaagaaattgacaataactccaagtttgata gaaaatctagatggattttgtgctgttgctgatattattggcggagaaaatgatgaggaa aagaatgtggccaatgagagtgatgatgacattcatattgatattgaaaatgatgataca gatgtaaaccctcttttgattggtaggtccacttcaccaaactctgtgtatgaaaagtta ctgaacgaagcaaattttaatgatagtaatcaagttaacgaaaacactgacaatatttat acacaaagtggtcagattatgactaaaacagaagggaagaaaattgataaagaaacattt ttagaatggaaaacatgtgaatctcaagcaaaaataagtggagaagatataccagatatt gatgtacaagccaaagtgacggaaaccataggaaataatactgaacagaatgaagaactg attccagtaaaaaatgacattgtagtaaatgagaatgaaagcagttctgtaacattggag gatagaagtttcttaaagaaggaagatacagtgaaacaaatagacactcaaaaagttctt gtgaatgctttagtgagagatgacggtgaagttgtccattttcctgtaccagttacagaa ataagtttacaaccaaagatgataacagaacaagagaagagtgtcctcaaggaatttttt gataacagaccatcaaaaactcctgaaagatacctgaaaataagaaattacatcattgaa tcttggaaaaaatgtcagcctagctatttaaacaaaacatcagtgagaccgggattaaag aattgtggagatgtaaacagtataggcagagtacatgcttatcttgaatgtataggagcc attaattttggatgtgagcaagcagcttacaaacatccaaggtcaatattttccctagtt ggtcgagaaaaactgtccaaagattctacatttgaagtaaattctgcaaagttagaagct atgagaccaagaaaaagaaaagtaaaagatgcttttggattttggattgatgaaaaagac cttgagggaacaacttttgagcatggaattttgattgaaagtcagccaaaagagacaaag ccaaaacaaataaaaacagcatatgatccgttcaagctgataccatgtctttcatttgat gatgaaaatcctgcacctttccttgtagagattcattgctcagcacttattgtcatggat atacacagtcatatatccaagacagaggtaattggcatgctgggtggtaaattttgtgca gagcaaggtaaacttatcattaccatggcaacaccatgtaacagcattagtacgggcatg cagtgtgaaatggatccagtttctcaaaaccaggcaagtgaggagatccgagggtcaggt atggaagtagtgggctggtaccattctcatccaacctttgccccaaacccgtcagtcaga gatattgaaacacagctaaaatttcagaattggttctcaaagggaggttgtaattttgtg ggtgtgatagtgagtccatacaacatgaggaagactggaatgtgttcagaagttaactgc cttaccattagtaatgagatacagccacaactacagtgcaatataccatataaattcagt tatacaacaaagttgtgcaatatgtcagaagtaaaccatattgtgttgacagcccaggat ctggccactagctacagtaactaccaaaacaaggttgatcttacttcaatatacaactca tcaaggggagtaagttgtttagaaaagatgattgaatcattgaagtcgtattgtatagag ccagagacatgtcagcttatagagagtgttagaaaagcttttaccccggtcgttcctgct catcataacatacatcaagatgatacatgcaattctttctctcaatctgaaaatccagat agttcctcaaatatttcttga

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