Ruditapes philippinarum (Manila clam): 132728059
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Entry
132728059 CDS
T09557
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132728059
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
132728059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
TPR_2
MAS20
Motif
Other DBs
NCBI-GeneID:
132728059
NCBI-ProteinID:
XP_060569653
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MEINIDDASKRISDIHLSKSSGENKENDDPDEVDQQRFNELVMKAKKLIGEGNIEDALKL
NKKALSICYSEKLAKKIKKMEDYIKAHADDSDEDDEDNGMLHLGKGFYLYRDLFNNLYAH
QQEGVLWLWSLFRRKKGGILGDDMGLGKTIQIISFLSGMFDMQKVKSVLIVLPVAVMVNW
EKEFQKWAPGLKVVAYHGNSKREKERALARVQRRGGVCLTTYGLVVTSWEQIGQQDGREF
VWDYMILDEGHKIKNPTKTSKGVHAIPAHNRIILTGTPVQNNLKELWSLFDFVHQGSLLG
LQKTFKMEFENPITRAREKDATVGEKKLGLEMAESLKKIIAPYFLRRTKAEVKEREKASK
DEPDSGVTHAVMPTMTRKNDLIVWTFLRDTQLKIYQDFLSLDSVKELLMTTKSPLVALNV
LKKICDHPRLLSTRACAQLGIQDEGLDDDILETEEGNLSAVTRIQHIADNILINESGKLL
FLVELLDRLKVEGHRCLVFSQSRKMLDIMQKVITNRGHKLMRLDGTIAHVQERENRIQKF
QTDSSYSVFLLTTQVGGVGLTLTAADRVVIFDPSWNPATDAQAVDRVFRIGQDKNVVIYR
LITCGTVEEKIYRRQIFKDSITRQTTGNAKNPYRYFSKYELKELFTLDDPHSSTTQQQLE
QMHSGQRLTDPSLDEHIAYLYSLDLFGLSDHDLMFSHGSEGGDEQDDEEAAVEPENDYIQ
HRVQKAREIIQMESSQPCTLEERLGKSTQQPGGEGGTKESYIKNQFSTWDFPKPGASQEE
EESEEDTDSENTESSHHSGTSDHADVVHIVESPQRDTRTDMLAQSDTIDLTSPLVKQEVK
QETDVKVEPVTMDYSRTPKQELGTVKHEMMDTEMKSPFAVQKFTKDEDEPMEIGTPKRQP
LSEYVNVNTDANAEAVRMTPGNKTPVKQDSPKLRLFETTPKSSRRDSNIVHEEIIISPDA
TKPLVQTRPPSTSNLSMMSLAGAFQPKFNSTECYAGESPDILNQSRNSKTSSGYSPAGRT
KIGAQNSPSRQPFQSLVAESPDTSIASSGKHRQLSSKSSGTDENSSCLVESDGENDDDPV
IIDDSVVVSEGEEKENIAPGNISVHDINNILQKSLGNAADHSFNESPVVTKSRRKSTAYR
RRVMESSDEDEDNDEDKETNKSLPDISFNTSRNKFEKSLENVTEDLASVGNNEGLENDQE
SNGHIETESANREEMHSDDGNDSDMYADNEADDDEGDNDDIDDSNDEHDIDHGSNGVTEI
SKDEDKLDVDNVCDVANEDEVNEDEVNDDENVEDESEEEEEVEEFEDLPETDQIRYNELV
EAGRIYCGNKQYEEGQACVLQALEIFPDPELQQTSMTLQRKIMKQRQRQQMEREQNMQT
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggagataaatattgatgatgcaagcaagagaatttctgatatacacctgtcaaagagt
tcaggtgagaacaaagaaaacgatgatcctgatgaggtagatcaacaaaggtttaatgaa
ttagtgatgaaagcaaagaagcttataggcgaaggaaatatcgaagatgcattgaaactg
aataagaaggctcttagtatctgttacagtgaaaaattggcaaagaaaatcaagaaaatg
gaggattatataaaggcccatgctgatgattctgatgaagatgatgaggataacgggatg
ttacatctaggtaaaggtttttacctgtaccgtgatctctttaacaatctgtatgctcac
cagcaggagggtgttctatggctctggtcattgttcagaaggaaaaaaggcgggattctt
ggagatgacatgggactgggtaaaacaattcaaataataagtttcctatcagggatgttt
gacatgcagaaggtcaagtctgttcttatagtgctgcctgtagctgtcatggtgaactgg
gaaaaagaattccagaaatgggcaccaggtctaaaagtggttgcttatcatggtaacagc
aagagagaaaaggaaagggctctagctcgtgtccagaggcgaggtggtgtgtgtttgact
acatatggtctagtagtgacaagctgggagcaaattgggcaacaagatggcagagaattt
gtatgggattacatgatactggacgaaggacataaaataaaaaacccaacaaagacaagt
aaaggtgtacatgctatacctgcccataatcggatcattctcactggaacacctgttcaa
aataatctcaaagagttgtggtcactttttgattttgttcatcaaggatctttgcttggc
ttgcagaaaacgtttaaaatggaatttgaaaatcctattacaagagcaagagaaaaagat
gctactgtaggtgagaagaagttaggactggagatggcagaaagtctgaagaagatcata
gctccatatttcctcaggagaacaaaggctgaggtgaaggaaagagagaaagcttctaaa
gacgagcctgattctggtgtcacccatgctgtcatgccaacaatgacaaggaagaatgat
ttaattgtatggacgttcctgcgagacacacaactgaaaatatatcaggactttctctct
ctagattcagttaaagagttgctgatgacaacaaaatcaccgctggttgctctgaatgtc
ttgaaaaaaatttgtgatcatccacgactgctgtctaccagagcatgtgctcaacttgga
atacaagatgaaggtttagatgatgacattttagaaacagaggaagggaatttatcggct
gttactcgtatacaacatatagcagacaatattctgatcaatgagtcaggcaaacttttg
tttctcgtcgagttacttgacagattgaaggtggagggtcatcggtgcctcgtcttctca
cagtcacgtaaaatgttagatatcatgcaaaaagtcataacaaacaggggtcacaagtta
atgagattggatggaacaatagctcatgtacaagagagagaaaacagaatacagaaattc
caaacagattcttcatacagtgttttcctgctcactacccaggttggtggggttggcctt
acactgactgctgcagacagagtggttatttttgatccaagctggaatccggccacagat
gctcaggctgtcgacagagtattcagaataggtcaggacaagaatgtggtcatctatcga
cttattacatgcggaactgttgaagagaaaatatacagacgtcaaatcttcaaagattca
ataactagacaaacaacagggaatgcgaaaaacccttacagatatttcagtaaatatgaa
cttaaagagctattcacgctggacgacccgcactcgtctacaacccagcaacagttggag
cagatgcacagtggacagcgactgacagaccctagtctagatgaacacatcgcatatctt
tactcactagacctgtttgggttaagtgaccatgacctgatgttctcacacgggagcgag
ggaggtgatgaacaagatgatgaagaagcagctgttgaacctgaaaacgactatattcaa
catagggttcagaaagctcgtgaaattattcaaatggagtctagtcagccgtgtacatta
gaggagagacttggcaagtcaactcaacagccaggtggggaaggtggtacgaaggaaagt
tacataaagaatcagtttagcacctgggacttcccaaaacctggcgcctcacaggaggaa
gaagagagtgaagaggacacggatagtgagaatacggaatcttcccatcattcagggacg
tcagaccatgccgatgttgttcacatagtggaatctccacagagagacaccagaactgac
atgctggcacagtcagacactatagatcttacgtcaccacttgttaaacaagaagtaaaa
caggaaactgatgttaaggtagaacctgtaacaatggactattctagaacaccaaaacaa
gaactaggtacagtgaaacatgagatgatggatacagagatgaaatctcccttcgctgtt
caaaagtttacaaaggatgaagatgagcctatggaaataggaacacccaaaaggcagcct
ctatctgaatatgtgaatgttaacacggacgcaaatgctgaagctgttagaatgacacct
gggaacaaaacacctgtgaaacaagattcacctaaactaagactgtttgagactacacca
aaatcatctaggagggatagcaacattgtacatgaagaaattattatatccccggatgct
accaaaccgttggttcaaactcggcccccaagtacatcaaacctaagtatgatgagtctt
gcaggtgccttccagcccaaatttaattctaccgaatgttatgctggtgaaagtccagat
attttaaatcagtccagaaattccaagacaagctctggttacagtcctgccgggcgaaca
aaaattggtgctcaaaattcaccttcaaggcaaccgtttcagtcacttgttgcagagtct
ccagacacttcaattgcaagctcaggtaaacatagacagttatcgagcaaatcaagcgga
actgatgaaaatagttcttgcttggtagaatcggacggggagaatgatgatgatcctgtg
ataattgacgattctgtggtagtgtcggaaggcgaggaaaaagaaaatatagcacctggt
aatatatctgtacacgatataaataatatcttacagaaaagcttaggtaatgcagcagat
cattcgttcaatgaaagtcctgtggttactaaatcaaggcggaaatcaacagcatacagg
agacgtgttatggaaagttcagacgaggacgaagacaatgatgaggataaagagacaaat
aaaagtttaccagatataagttttaatactagtcgtaataaatttgaaaaatctcttgaa
aatgtaacagaggacttggcaagtgtaggaaacaatgagggtttggaaaacgatcaagaa
agtaatggacatatagagacagaatctgcaaatagagaagaaatgcatagtgacgatggt
aatgatagtgacatgtatgctgacaatgaagcagatgatgatgaaggtgataatgatgac
attgatgatagtaatgatgaacatgatattgatcatggtagtaatggagtcactgaaatc
agtaaagacgaagataaattagatgtagataatgtatgtgatgttgccaatgaggatgaa
gttaatgaggatgaagttaatgatgatgaaaatgtcgaggatgagtcagaagaggaagag
gaggttgaagaattcgaagatttaccagagactgatcagattcgttacaatgagctggtg
gaggctggcagaatatattgcgggaacaagcagtatgaagaaggtcaagcttgtgttcta
caagcgttagagatttttcctgacccggaactgcagcagacgtcaatgaccttacagcgt
aaaattatgaaacaaaggcaaagacaacagatggaaagggagcagaatatgcaaacatga
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integrated database retrieval system
