KEGG   Ruditapes philippinarum (Manila clam): 132728236
Entry
132728236         CDS       T09557                                 
Name
(RefSeq) elongin-C
  KO
K03872  elongin-C
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    132728236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132728236
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132728236
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     132728236
   Cul5 complex
     132728236
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     132728236
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 132728236
NCBI-ProteinID: XP_060569828
LinkDB
Position
Unknown
AA seq 119 aa
MSDEKGDKGDEEKVYGGCEGPDAMYVKLVSSDGHEFIVKRDHALTSGTIKAMLSGPGQFA
ENETNEINFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq 360 nt   +upstreamnt  +downstreamnt
atgtctgatgagaaaggagataaaggggatgaggagaaggtgtatgggggctgtgaaggg
ccagatgctatgtatgtaaaacttgtgtcatcagatggtcatgaatttattgttaaaaga
gatcacgctttaacatctggcactattaaagctatgttgagtgggccaggtcagtttgct
gaaaatgaaacaaatgaaataaattttagagaaataccatcgcacgttttacagaaggta
tgcatgtacttcacttacaaagtacgatatacaaacagttcaacagagattccagagttc
ccaattgcaccagaaattgctctagaattgcttatggctgccaactttttagactgttaa

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