Ruditapes philippinarum (Manila clam): 132728269
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Entry
132728269 CDS
T09557
Name
(RefSeq) huntingtin-interacting protein 1-related protein-like isoform X1
KO
K04559
huntingtin interacting protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132728269
Membrane trafficking [BR:
rphi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
132728269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANTH
I_LWEQ
ATG16
Spectrin
EzrA
Motif
Other DBs
NCBI-GeneID:
132728269
NCBI-ProteinID:
XP_060569864
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MSSRHLPRVIGGQRGKSTLEVEREHFEKNQTVAINKAINTQETPVKEKHLRNTILGTFTD
HGGGLFWHVTTKQMQLQANPILCWKFCHVLHKLLREGHENVFIDSQKYRTFLEELGKLWG
HLRDGYGRLIAAYTVLLNQKLVFHKKYPNIPGNLLMTDDVFARICGSDVNGYFEISVDML
DYMDEVLNLQKQVFGSLDRARANSMTNSGQCRLAPLILCIQDSCQLYDYIVKILFKLHSS
LPPDTLSGHRDRFLAQYKKLKEFYFQSSNLQYFKNLVTVPLLPDDPPNFLIQSDFNKHVK
PVAVVEEPEPEPERESITPEPEIVTDLIDTSEDRFDATFGSRQESFNFNGGPPEVDERDL
LIERLTKEIQQLRAELERVKSEDQRIISSLRDDISKLEKILSELRLSADKALQDNENLKA
ELSKAKVHMGAAAKLTEAEKHTKASEEKFKKMKDVYQKLRDEHVTLLRQHGDLNKQNAAD
KKALEEKEQVIKDNEANMVRMEDERKVIQESLQNSADEVTQQLAQTTAKNTDLEKVKQEL
ETQLKSVQNSEETLQKELQSEQSRVQNLESQVEQLSEEKAGQEEKLTNQIEGLQSNLDSL
KGEKENMEKDLQAQIATLKTTLAATEQSKAQTEQDLSKQLEELEQKLETLMEEKQSTETR
LTQILDDLHRKMLSSSIAEGRAFIQDALDQFHNQTFTTARCTAEFLLLRAEPVIKSLEKL
ESANTVYSADKKDLENLVECITGFSHHLGDCVIHGIATSQSTAEIESGQHLANHCRSAGE
SGLTLLAAVEKGGNISSEVSATVNHIKQLMSLTEELVPKSDDVKTEEIGDMVDSEMQLTS
KAIEQAAAKIQTCIEMFQTALEMLQKTREGDSGVQLEVNERILDACTDLMKCIKILVEKS
RDLQQEIVAQGRGTSTAKDFYKKNHRWTEGFISAAKAVGWGATTLMEAADKVVKGEGKLE
QLIVCSQEIAASTAQLVVSSRVKAKRGSNALQNVQDASKGVSRATGNVVATVKTGAQIIE
EKSLMDFTHLSLIQTKKQEMDSQVRVLELERELEIERQRLSVLRKQHYTLAAETEGDQEG
EEVSVVIYNVYKYIQTLCTVNATCSLSLSKVYHIMKCA
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaggcatcttccaagggtgattggtggacagcgtggtaaatcaaccctcgaa
gtggagagagagcattttgagaaaaatcagactgttgccattaataaagccataaataca
caagagactccagtaaaagagaaacatctgagaaatacaatattaggtacattcactgac
catggaggagggttattctggcatgttaccacaaagcagatgcagttacaggccaaccca
atactgtgttggaagttttgtcatgtactacacaaattattgagagagggccatgaaaac
gtgtttatagattcacaaaaatacagaactttcttggaagagctaggcaaattatgggga
cacttgcgggacggatatggaagattgattgctgcttacacagtattgctgaaccaaaag
ttagtcttccacaaaaaatatcctaacataccaggaaatttgttgatgactgatgatgta
tttgctagaatctgtgggtctgatgtcaatggctattttgagatcagtgtagatatgctg
gactatatggatgaagtattgaatcttcagaaacaagtgtttggttcacttgacagagcg
agagctaactcgatgacaaattctggccagtgcaggctcgcacctcttattttatgtatt
caagactcgtgtcaactgtatgactatatcgtcaaaattttattcaaattacattctagt
ctcccccctgatactctgtctggacacagagatcgtttcttagcccaatataaaaaattg
aaggaattttactttcaaagcagtaatcttcagtattttaaaaatctagtcacagtacct
ttattaccagatgatccgcctaatttcctgatccagtcagactttaataaacacgtgaag
ccagtagctgttgtagaagaaccggaacccgaaccggagcgagagtcaataacaccagaa
cctgaaattgttaccgacctcattgatacatccgaggatagatttgatgcaacatttgga
agtcggcaggaaagttttaattttaatggtggaccaccagaagttgatgaaagagattta
ctaattgagagattaacaaaagaaatccaacaattgagggcggagttagagagggtgaaa
tcagaggaccaaagaatcatatcatcattacgggacgatatctcaaagttggagaaaata
ttgtcagagctgcgcttatctgcggacaaagctctacaggacaatgaaaacttgaaggcg
gagctaagcaaagccaaagttcatatgggtgcagctgccaaactcactgaggctgaaaaa
cataccaaagccagtgaagaaaagtttaagaagatgaaggatgtgtatcagaagctaaga
gatgaacacgtaacacttcttagacagcatggggatttgaataaacaaaatgcagctgat
aagaaagcattggaggaaaaagaacaagtaataaaggacaacgaggccaatatggtacgc
atggaggatgagaggaaagttatacaggaaagtttacagaactctgctgatgaggtcact
cagcagttagcccaaactactgctaaaaatacagatcttgaaaaagtgaagcaggagctc
gagactcagctgaagtcagtacagaatagtgaggaaaccttacagaaagagcttcaatct
gagcagtccagagttcaaaaccttgaatcacaagtggaacaactatcagaagagaaggcg
gggcaagaggaaaaattaaccaatcagattgaaggattacagagtaatcttgattcatta
aagggagagaaagaaaacatggagaaggatctgcaggcacagattgcaacattgaagaca
acgttagccgcaacagaacaaagtaaagcacaaactgaacaagatttgagtaagcagctt
gaagaattagaacaaaaactagaaactttgatggaagaaaaacagtcaacagaaacaaga
ctgacacaaatcttggatgatttacatagaaaaatgctgagtagcagtatagctgagggc
cgtgcttttatacaggatgcattagaccagtttcacaatcagacattcaccacagcacga
tgtacagcagaattccttttacttagagcagagcctgtgataaaaagtttagaaaaattg
gaatctgcaaacactgtttattctgcagataagaaagacttagagaatttagtggaatgt
ataacaggattttcccatcacctaggcgactgtgtaatacatggtatagcaacatcacag
tctactgcggagatagaatcgggccaacatttagccaatcattgtaggtctgctggggaa
agtggtctaacacttcttgctgctgttgagaaaggtggaaacatatcatcggaggtgtcg
gccactgtgaatcatatcaaacagttgatgagcctgacagaagagctggtgcctaaatca
gacgatgttaaaacagaggagataggagacatggttgatagtgagatgcaactgacaagt
aaagccatcgaacaagccgctgctaagatacagacttgtatagaaatgttccagacagcc
ctcgaaatgttgcaaaaaacaagggaaggagattcaggggttcagcttgaagtgaacgaa
cgtattcttgatgcttgcactgaccttatgaagtgtataaagatcctggtagagaaatct
agagatcttcaacaagagattgttgcccaaggaaggggaacatcaacggccaaagatttt
tacaagaagaatcaccgctggacggaaggttttatatcagcagcaaaggctgttggctgg
ggagctaccacacttatggaagcagctgataaggtagttaagggagaaggtaaactcgag
cagctgattgtatgttcacaagagatcgcagcctccacggcacagcttgtcgtctcatca
cgtgtgaaggcaaaaaggggaagtaatgcattacagaatgttcaagatgcatcaaagggt
gtttccagggcaacaggaaatgtggtggctacagttaaaactggagcacagattattgaa
gagaagagtctgatggatttcacacatttatcactgatacagaccaagaaacaagaaatg
gattctcaggtgagagtgctggagcttgaacgtgagttagagatagagagacagaggttg
tcagtgctgaggaaacaacattacaccctagccgcagagaccgagggagatcaggaaggg
gaagaagtgagtgttgttatatacaatgtatataagtatatacaaacattatgtacagta
aatgcaacttgtagtttgtctcttagtaaagtataccacattatgaaatgtgcctaa
DBGET
integrated database retrieval system
