Ruditapes philippinarum (Manila clam): 132728506
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Entry
132728506 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rphi01001
]
132728506
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132728506
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132728506
Protein kinases [BR:
rphi01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
132728506
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132728506
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-B_box_Trim66
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
132728506
NCBI-ProteinID:
XP_060570132
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MAEIPEKDVETDKKMDSSKCAKCKEELTVEKQAKLLHCLHSFCQACLENYSTSKSKNGSE
ESQKDANVDGSTNQMKSCAEVSSTDDSKTRCPECHVEYVAANVLPNPFIHTSKKVDARIE
DGSPSDAEKFPVCTSCEDNQKASSFCVDCQEWLCDPCVVAHKRVKLTKDHSISNKVKPDE
VKEGIVGDSKQRHVHCQTHKTEMLKLFCLTCETLTCRDCQLNDHKDHKYQYIEETIEQQK
KLLMEGVAALKSRLKTNQEMAEKITQKEKDIKDQQVEVFKEVRKVADLITNELISWCKQL
LNFLQGVCHGRIKDLTFKKKEVDTFAKRAKHTISFVESALQSGDDLSVLHTKSFMTKNIK
TLQDQTINFQNTLLDLNIKYENDAKFLTKNVSKMGFINVNGKSYPQQSVAEPQKPAICTL
NNLSKENFSQQIAELIHQQPHATREQYKNLPVDRKKQFLAQLMSNCGRQRPAGGQQQVNL
QQQQQQLQQQAQIQNRMGQFNSDSGAVQDLYKVRPPQPVRQPGQFFQQNTFQTNLTSTSR
HPLQQQPFRPGPSLATQNLQHWRGTRPPQPGYPNADIGFGVSSTQNWQDASYNSLQNLMS
FSNGNIASSSTYLPQGSAGPNNSAVSSSLTRPNSNPNLIPGNKLPPGKFDIDPLNLRGGS
AEPVRVKQEPKDRDFSSCQFSNRPPNQTTPKPPDHNPRLQSPSTSTNHHSPGHTPSPSHS
DGGPGAAHRSSISPAMPDINIIDTDRNELLQGLVNPSGQRLNAYHLQPKHDPSDPSEDYC
AVCHNGGDLLCCDKCPKVFHLQCHVPAISTNFSSKRGIKQKSYTFALLHPLAEAKCEVWT
CTLCSADEELKIKSPIPKEYEVTSTGKRKAPNGLVDKEIKVCERILLELFCLEISTVFHE
PVPKSVPNYHKIIKDPMDFGAIKCKLRRGHFAHYNSVEEFLSDIKLVFRNCFKYNSEKSD
VYAVGKSVQNYFESLVKHFLPCYVDYLSRRTPSPVTTMESNGTDGQSRNKKRRSPAPDST
RDNNSPVHFS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggcagagattccggagaaggatgttgaaactgacaagaaaatggatagttctaaatgt
gcgaagtgtaaggaggaattaactgttgaaaaacaagctaaattactccattgtttacat
tcattttgtcaagcatgtcttgaaaattattcaacatccaagtcgaaaaatggaagcgaa
gagtcacaaaaagacgcaaacgttgacggtagtactaatcaaatgaaatcttgtgcagaa
gtttcttcaactgatgatagcaaaacaagatgcccagagtgccatgtagagtatgttgca
gctaatgttctaccaaatccattcatacacacttcaaaaaaggttgatgctcgaattgag
gatggttccccatcagatgcagagaaatttccggtgtgtacgtcctgcgaagataaccaa
aaagcttcctcgttttgtgtcgattgccaagaatggttgtgtgacccttgcgtggtggca
cacaaacgcgtcaaactcactaaagaccacagcatttcaaacaaggtaaaacccgatgaa
gtgaaggaaggtatcgtcggggacagtaagcaaaggcacgttcattgccagacacacaag
acagaaatgctaaagttgttctgtctgacttgtgaaacattgacgtgtagggattgtcag
ctgaacgaccataaagatcacaagtaccagtatattgaagagacgattgaacagcagaag
aaattactaatggaaggtgtggcggcattgaagtcaaggctaaaaactaaccaagaaatg
gctgaaaaaataacacagaaagagaaagacattaaagatcaacaggttgaagtgtttaag
gaagtgagaaaagtggctgatttgataacaaatgaattaatcagttggtgtaaacagctt
ctgaattttcttcaaggtgtttgtcacggtagaattaaagacttgacatttaagaaaaaa
gaggttgataccttcgcaaaacgggcaaaacatacaatatcatttgtggagtcagccctg
cagtcaggcgatgacttgtctgtgttacacactaaaagctttatgactaaaaatatcaaa
actttacaagatcaaacaataaatttccaaaatactttgctagatttgaatatcaagtac
gaaaatgatgcaaaatttttaacaaagaatgtaagtaaaatgggatttatcaacgtgaac
ggtaaatcttacccccagcaatccgtagctgagccgcagaaaccagctatatgtaccctc
aacaaccttagcaaagaaaatttctcgcagcaaatagctgaattaatacatcaacagcca
cacgcaaccagagaacagtataaaaatctccccgtggaccggaagaaacagtttttagca
cagttaatgagtaattgtggaaggcaaaggccagctggaggtcagcagcaagtaaattta
cagcaacaacaacaacagttacaacagcaggcacaaatacagaatcgcatgggacagttt
aacagtgacagtggtgcagttcaagatttatataaagttcggccaccgcagcctgtcaga
cagccgggacagttctttcaacagaacactttccaaacaaatttgaccagtactagtagg
catccacttcaacaacaacccttcaggccagggccaagcctagcaacacaaaatttacag
cactggcgaggaacaagacctccgcagcctggttatcccaatgctgacattggttttggt
gtatcttctactcaaaattggcaggatgcttcgtacaattctctgcaaaatctgatgtct
tttagcaatggaaacattgcctcttcctctacgtacctacctcaaggcagtgccggtcca
aacaattctgcagtatcatcgtccttaacaaggccgaattccaatccaaacctcattcca
gggaacaagctccccccaggaaaatttgatatagatccgttaaatctacgaggaggcagt
gcagaacctgtgagagtcaaacaagaaccaaaagaccgggacttcagttcttgccagttt
tccaacagaccacctaaccaaacaacacccaaacctccagatcacaacccaagattgcag
tctccatctaccagtacgaatcaccattccccgggccacacacccagtcctagtcattca
gatggagggcctggggctgctcatcgttcctcaatctccccagccatgccagatattaat
ataattgacactgaccgcaatgagcttctacagggattggtcaatcctagtggtcaaagg
ttgaatgcatatcacctccagccgaagcacgatccctctgacccatcggaagattactgt
gccgtgtgtcacaatggaggggacctgttatgctgtgacaagtgcccgaaagtattccat
ttacagtgtcatgtaccggctataagcaccaacttctcatcaaaacgagggatcaaacaa
aagagttacacatttgccttgttacatccactagcagaagctaaatgtgaagtatggaca
tgtacattgtgctcggcagatgaagaattgaagatcaagtctccgatacccaaagagtac
gaggtgacgagcactggcaagcggaaagcaccaaacggacttgttgacaaggagattaag
gtatgtgagaggatattactggagttattctgtttggagatcagcacagtgtttcatgag
cctgttccaaaatcggtcccgaattaccacaagatcattaaagatccgatggattttgga
gccatcaaatgcaagcttcgtagagggcattttgcccattacaattcagtagaagaattt
ctatccgacatcaagcttgtgtttcgaaactgctttaaatacaactctgaaaaatcagat
gtttatgctgtaggaaaatcagttcaaaactattttgaatcgctcgtgaaacatttcttg
ccgtgttatgtagactacctcagcaggcgcacgcctagtcctgtcacaacaatggagtca
aatggaactgacgggcagagtcgcaataagaaacgcagaagtccggcaccagactctaca
agggataacaatagtccagtccatttttcttga
DBGET
integrated database retrieval system
