Ruditapes philippinarum (Manila clam): 132728542
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Entry
132728542 CDS
T09557
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132728542
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
132728542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_ELP1
Beta-prop_EML_2
Se-cys_synth_N
Motif
Other DBs
NCBI-GeneID:
132728542
NCBI-ProteinID:
XP_060570172
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MKNLKLATSLCSKIEEAAGAQCVDVNFDNGTIYIATDRQLLECDPGSGTISGKLDLANVP
DQTSDATFISIRHLPEEFSVCAATNKGDLLLWNVLSHEVECVGTVESGLTAMSWSPEQEL
VILTTGAQTLIVMTREFDPITELSLHPDNSGEAEFVQVGWGKKETQFHGSVGKQAAHVRP
DEVTPALMWDDHIPRISWKADGQYFAISSIHPQTGARKVHVWTREGAHHSTSEDVNGIEQ
SLSWRPSGNLIATSQRRPNKHDIAFFERNGLRHGEFTLPFPVDQVKVKEVYWNNDSTILA
VWCEDLADGNNVKSYVQLWTTGNYHWYLKQSLHFEGPEQKIGAMIWDPEQEYKLHIVCKN
GGYFQYTWAWATTHSAGRSCDDQAIVAVIDGANVLMTPMRHMVVPPPMSAYELQLPGSVN
QVVFAPPPLSNNIAVILVDNRVAIFKFTETGKSGSEVKVNAAGGNGFKRCCTFPSLQGIY
SIKGLGEDCGYPLATSHFTWISEDIILFTTVATSGSPHSIIHKAQIDNEKITVIGSSAVE
SRIFNTAYDSCSKCLAVQLIDGTVLKYTPEDEMLLPWETTDGIEVQFPSHCSQMALCHIG
GETCVLGLTQRYRFNVNNIEVASNCTSFSVHDEFLLLTTLSHTCRCITLHTKVKDLPTLS
DGKAHPFDESVRRVERGSQIVISVADDTKLILQMPRGNLETIHPRALVLTAVRKHLDRLQ
YVEAFTIMRKHRINMNLLYDHNPEMFLQNIKLFVQQIAAVNHINLFLTDLIEEDVTVTMY
TAAYERNKITSAGNGSTVEGNKVDKVCDAVREALKSISENKYMLSIITTYVRKTKPQLEE
ALQLVKNLRDCENDHRERNAEETLKYLLFLVDVNELYDVALGTYDFDLVLMVAEKSQKDP
KEYIPFMNQLRKLETNYQRYTIDKHLKRYTKALENIVKCGPEHFSECLSLINEHKLHTVA
LQLYLSSTTQYKEIASCYGDLLAGKRQHEEAAIMFVKGENWESALTSFTACHQWQQVFCM
TSQLNFSSEQEVETARQIADDLKTRGRHSEAAIVLEQYAKDSEEAIVTLIQGCLWDEALR
MMHKYKRTDFIETDLKSHLVDSFEGHVNNLDQMKANFEKYRSRLAAVRQEKEKARLELIE
SGGAGNVQDADLFSDTSSATGESIQSSRYSAETSSSAYSKMSGRSIKNRRKAEHKKWRLK
EGSEFEDFALIAELAKIIKYVDGLRDEMRSLVRALVMFHYDRQGEQIQRQYDNFLSLIDK
SLPQIWLDEETDQEFTPVLGPNTTANTIALAMQQGKTIQTADREDKLDPVIKFAPVLQKD
VKWKLYALET
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttgaagctagcaaccagcttatgtagcaagatagaagaggcagctggtgcc
cagtgtgtagatgtaaactttgacaatggcacgatttacattgctacagatagacaactt
ctagaatgtgatccaggttcaggaacgataagtgggaagttggacctggcaaatgttcct
gatcaaacatctgatgcaacatttatatcaatccgtcatttaccagaagaattttctgtc
tgtgctgccacaaacaagggtgacttgttgctatggaatgttttgtcacatgaggtagaa
tgtgtgggaactgtggagtccgggctcacagctatgtcgtggagtcccgaacaggaattg
gtgatccttaccacaggtgcccagacattgatcgtgatgacacgagagtttgatccaata
actgagcttagtttacatccagacaactcgggcgaagctgagtttgtacaagttgggtgg
gggaagaaggagacacagtttcatggatcagtgggcaaacaagctgcacatgttaggcct
gatgaggtgacgccagcattgatgtgggatgatcatatacctagaatatcgtggaaagct
gatgggcagtacttcgcaataagttctatacatccacaaacaggtgctcgtaaggttcat
gtatggacaagagagggagcacatcattctaccagcgaggatgtaaatggtattgaacag
tctctttcctggaggccaagtggaaatttgatagcaacgtcccagagacgccctaacaaa
catgacattgcattctttgagagaaatggtctacggcatggagaattcactttaccattc
ccagttgaccaagtgaaggtaaaggaagtttactggaacaatgactctactatacttgcc
gtctggtgtgaagatctggcagacgggaacaatgtgaaatcttatgtgcaattatggact
acagggaactatcactggtatcttaaacagagtttacattttgagggccctgaacaaaag
ataggtgctatgatatgggacccggaacaagaatataagctgcatatagtgtgtaaaaat
ggagggtattttcaatatacttgggcctgggccacaacacatagtgcaggtagaagctgt
gatgatcaggccatagtagctgtgattgatggagcaaatgtcttgatgacaccaatgcgg
cacatggtagtccctcccccaatgtcagcctacgaattacagttaccaggaagtgtcaat
caagtggtgtttgctccgcccccgctgtcaaataatattgcagttatacttgttgataac
agggttgccatattcaaattcactgagactggtaaatcggggtcagaggtcaaagttaat
gcagctggaggaaatgggtttaaaagatgttgtacatttccttctctacaaggaatttat
agtatcaaaggattaggtgaagattgtgggtatccactggcaacatcccattttacgtgg
atatctgaagatattatactgtttacaacggtggccacatctgggtcaccccattctata
atccataaagcacagatagacaatgagaaaataactgtcataggaagttcagcggtagaa
tctaggatatttaatacagcatatgactcgtgcagtaaatgtttagctgtacaactaatt
gatgggactgttcttaaatatacaccagaggatgagatgttgttaccatgggagacaact
gatggcattgaagtgcagtttccttctcattgttcacagatggcgctctgtcacattgga
ggggagacatgtgtcttgggattaactcagagatacagatttaatgtcaacaatattgag
gttgccagtaactgtacttcattctctgtacatgatgagttcttgttgttgacaacgttg
tcccatacatgtagatgtatcaccttgcataccaaggtcaaagatctgcccacattgtca
gatggtaaggctcatccatttgatgagagtgtacgtcgtgtagaaagaggttctcaaatt
gttatttctgtagcagacgacactaaactcatacttcagatgcctcgaggtaatctggaa
accattcaccctcgagctcttgttctcacagctgtacgtaaacatcttgacaggttacag
tacgttgaggcgtttaccatcatgaggaaacatagaattaacatgaacctgttgtatgat
cacaatccggaaatgttcttacagaatatcaaactatttgtacaacagattgctgctgtc
aatcatattaacttgttcctcacagatcttatcgaggaagatgtgacagtaacaatgtat
acagcagcctatgagaggaataagattacgtctgctggtaatgggtctactgtagaaggt
aacaaagtggataaagtatgtgatgcagtcagggaggcccttaaatccatcagtgaaaac
aaatacatgttgtccatcatcacaacgtatgttcggaaaactaagcctcaactggaggaa
gctcttcagctagtaaaaaatctcagagattgtgagaatgatcaccgggagagaaatgcg
gaggagacattgaaatatcttctatttctggtggatgttaacgagctgtatgatgtagca
ctcggtacctatgattttgatctagttctcatggtggctgaaaaatcacaaaaggatcca
aaggaatatattccattcatgaatcaactgagaaaattggagacaaactatcagaggtac
acaatagacaaacatttaaaaagatatactaaggccctggaaaatattgtcaaatgtggc
ccggaacatttcagtgaatgcttgtcattgatcaatgagcacaaattacatactgtggct
ttacaactgtacctttcctctactacacaatataaggaaatagcaagttgctatggagat
ttactggctggtaaacgtcaacatgaggaggcggccattatgtttgtcaagggagagaat
tgggagtcggcattaacttcatttacagcctgtcaccaatggcaacaggtgttctgtatg
acatcacaattaaacttctcttcagaacaggaggttgaaacagccagacagatcgcagat
gatttaaagacaagaggcagacattctgaggctgctatagttctagaacaatatgctaag
gattcagaagaagcaattgtgacattaatacagggatgtttatgggacgaggcacttcgt
atgatgcacaagtataagagaactgactttattgagacagatctgaaatctcatttagtt
gatagctttgaaggtcatgtcaataaccttgatcaaatgaaggcgaactttgagaaatat
cggtccagactggctgctgttagacaggagaaggaaaaagctagactagaacttattgaa
agtggtggagcaggtaatgtacaagacgctgatttattctcggacacaagtagtgccacg
ggggagagtatacagtcatctagatactctgctgaaacttctagttctgcttacagtaaa
atgtcgggtcgttccatcaagaaccgccgcaaagctgaacataagaaatggaggctgaaa
gaagggagtgaatttgaggactttgctctgatagctgaattggctaaaatcataaaatat
gttgatggattaagagatgaaatgaggtcattagtgcgggcattggtgatgtttcactat
gacagacaaggggaacaaatacagagacaatatgacaacttcctctcattgatagataaa
tctctaccacagatctggctggatgaggagacagatcaagaatttacacctgttcttggg
ccaaacacgacagcaaatacaatagctcttgccatgcagcagggaaaaactatacaaaca
gcagatagggaagataaattagatcctgtgataaaatttgcgccagttttacagaaagat
gtgaagtggaaattatacgctttagagacttga
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