Ruditapes philippinarum (Manila clam): 132728585
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Entry
132728585 CDS
T09557
Name
(RefSeq) fibrous sheath CABYR-binding protein-like
KO
K14966
host cell factor 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03083
Polycomb repressive complex
rphi04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132728585
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
132728585
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132728585
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132728585
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132728585
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132728585
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
132728585
HMT complexes
COMPASS/SET1 complex
132728585
MLL-HCF complex
132728585
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
132728585
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
132728585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
132728585
NCBI-ProteinID:
XP_060570229
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MLIYILFSAGQHKTINVSALQQTLSGVVQSPQVVTAGKTNITVVSQAGGTSQIIRTIPAS
QLISSSTPTASSLLGTSQSNVSLISAGSNQIGNQTIQVAQSQQPSSKPVQITITPQGQVA
TTPVVVQASEPVATDEADGACTDGIHCGTPPPCTDGIHCGTPPPCTDGIHCGTPPPCTDG
IHCGTPPPCTDGIHCGTPPPCTDGIHCGTPPPCTDGIHCGTPPPCTDGIHCGTPPPCTDG
IHCGTPPPCTDGIHCGTPPPCTDGIHCGTPPPCTDGKHCGTPPPSDNTHFVPIKDGACSD
GIHCGTPPPQEGYGTCTDGIHCGTPPPQEGNGTCQDGIHCGTPPPQEGSGTCTDGIHCGT
PPPQEGNGTCTDGIHCGTPPPQEGNGTCTDGIHCGTPPPQEGNGTCTDGIHCGTPPPQET
EGTNEENQENVPTTETEATSQEAETTTAEGQQEADPLSFTQLDGGNSGETSTVDEAVSAE
DMLASGEPSTTGVLDETEAMVTAPSTEATEGVEPTPEIKEEPMDTTDVAQPEQPQQQSES
EQSIDPVTGLHNGMPVQLDTSTSSGLLGQSVSLPDQIFAVPNSGQDTSSSDIKPEDLLLP
KSEPVDLGLISQASDSGQDPLATLAMAAASSAGAVTSIKQEPIKPTQETKVLTTVSTPKK
EGNMWYDVGIIKGTSCLVSYYHLPAEGGQGDIADKKDIDVVSIQDHSVLKRQELLPGTAY
KFRVAGINACGRGPWSEISAFKTCLPGYPGAPSAIKISKSADGAHLSWEPPQNTAGKITE
YSVYLAVRNAAQQAEQKPGGAAQLAFVRVFCGPTASCVVNSNSLASAHIDYTTKPAIIFR
IAARNEKGYGPATQVRWLQDAAQGAAAAATNKLPVKRTVDAAQLQAIQMKKIKTDDEAGM
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgttgatatatattctgttttcagctggtcagcataaaacaataaatgtatcagcccta
caacagactcttagtggtgttgtacaatcacctcaagttgttacagctggcaaaacaaat
ataacagtcgtatcacaagctggaggaacctctcagatcatcaggactataccagcatca
caacttatctcctcttctacaccaacagcctcttctctcctcggtaccagtcaatcaaat
gtttccctcatatctgctggttcaaaccagattggtaaccagactattcaagttgcccag
tctcagcaaccatcttcaaaaccagtacagatcactataacaccacaagggcaggtggct
actacacctgttgtcgttcaagcatcagaacctgttgcaactgatgaggcagacggtgct
tgtacagatggtatccactgtgggactccacccccatgtacagatggaatccattgtgga
actccccctccatgcacagatggaatccattgtggaactccccctccatgcacagatggt
atccactgtggaactccccctccatgcacagatggaatccattgtggaactccccctcca
tgcacagatggaatccattgtgggactccacctccatgcacagatggaattcattgtggg
actccacctccatgcacagatggaatccattgtggaactcccccaccatgcacagatgga
attcattgtgggactccacctccatgcacagatggaatccattgtggaactccccctcca
tgcacagatggaattcattgtgggactccccctccatgcacagatggaaaacattgtgga
actccaccaccatcagataacacacactttgtacctataaaggatggggcatgctctgat
ggaatacattgtggaactcctcctccacaagaaggttatggaacctgcacggatggaatt
cactgtggaactccgccccctcaagaaggaaatggaacttgccaagatggcattcactgt
ggtacaccacccccacaggaaggaagtggaacctgcacggatggaattcactgtggaact
ccgccccctcaagaaggaaatggaacttgcacagatggaattcactgtggaacccctccc
ccacaggaaggtaatggaacctgcacagatggaattcactgtggaacccctcccccacaa
gaaggtaatggaacctgcacggatggaattcactgtggaacaccacctcctcaagaaact
gagggaactaatgaagagaatcaagaaaatgttccaacaactgagacagaggcaacatca
caagaagctgagacaaccacagctgagggacagcaagaagcagaccctctttcatttacc
cagcttgatggtggaaattcaggggagacaagtacggttgacgaggccgtgtctgcagaa
gatatgctggcatctggagagccttcaaccacgggcgtcctagatgagaccgaggccatg
gtcacagcaccttctacagaagcaactgaaggtgtagagcccacaccagagattaaagaa
gaaccaatggataccacagatgtggcccagccagagcagccccaacagcaatctgaaagt
gagcaaagcatcgacccagttactggactacacaatggcatgcctgtgcaacttgacaca
tcaacaagtagtggtttattgggtcagtcagtatctttacctgaccaaatatttgctgta
ccaaactcgggacaggacacttctagttcagatattaaaccagaggacttactccttccg
aaatccgagccagtagatctaggactgatcagccaagcttctgactctggtcaagatcct
ctagctacactagcaatggcagcagcatcctcagcaggggctgtaactagtatcaaacaa
gaacctatcaaacctacacaagagactaaagtattaacaacagtttctacaccaaagaaa
gaagggaacatgtggtatgatgttggtatcattaaaggaacgtcctgtcttgtgtcatat
taccatctaccagcagagggtggtcagggagatatagctgataaaaaggatatagatgtc
gtgtcaatacaggatcacagtgtattaaagagacaagagttattgccgggaacagcatac
aagttccgggtcgcgggtattaatgcttgtggacgtgggccatggagcgaaatatcagca
ttcaaaacctgtctaccaggttacccaggtgctccatcagccattaaaattagcaagagt
gcagatggtgctcatctttcatgggaacctccacaaaatacagctggaaaaattactgag
tactctgtataccttgctgtacgtaatgcagctcaacaagcagaacagaaaccaggtggc
gctgctcaacttgcatttgtacgagtattttgtggaccgaccgcatcatgtgtggtgaat
tcaaacagtttagccagtgctcatatagactatacaacaaaaccagctattatattccgt
atagcagctcgtaatgagaaaggatatggtccggctacacaagtcaggtggcttcaagat
gctgcccaaggagctgctgcagctgctacaaataaattgcccgtgaagagaactgttgat
gcggcacagctgcaggcaatacaaatgaagaagattaagacggatgatgaagctggcatg
taa
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