Ruditapes philippinarum (Manila clam): 132728634
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Entry
132728634 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132728634
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
132728634
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
132728634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
ArsA_ATPase
Cas3-like_C_2
WHD_1st_NFRKB
Motif
Other DBs
NCBI-GeneID:
132728634
NCBI-ProteinID:
XP_060570288
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MEEYKQELKLVKEELETVEVQLEDILQRQSDLLTRRDELEAILKQNESKSEVHNKDWEKK
DFQWSERLQDEMKSVFGLDNLRPMQLQTMNVTMSGKDCILIMPTGGGKSLCFQLPALLSK
GITLVVSPLVSLMEDQVMALQGYKVDATMLNASSDKETIKRVQEAMIDHNATLKLLYVTP
EKLSKSKRFMARLEKMYKVGRFARLVIDEVHCCSQWGHDFRPDYKFFGDPKREFPDVPIP
WPLQTKFPYFVLEEFLKKFXKIXNFLLFRAPFNRPKIFYFXVREKPSVQKEVMDDIQKLI
NTKFNNQSGIIYTFSKKESEDVTSDLQSRGIKAGCYHADLSPKYRSTVHKAWIDNKIHVV
VATVAFGMGIDKPDVRFVIHHSLSKSMENLYQESGRAGRDEKKSHCIVYYRLQDVFRQSA
MVMAEQTGLNNLYGIMSYCTDLSKCRRSMIARYFGEVWEASQCKKMCDHCNSDYPVEKKD
LTAFCVNVLKILDNAGSSENKLTAIKLLDAWQGKGPSVNRIKGTETGTDREKLERILAFM
LNKQYIREDFHFTPYSTISYLVPGPNAGLIRNRTQKVFIDMRGRRISDSGSPSLSKVKGH
QYSESSSSKVKDSIPKLVIVNRENSVFTKQKHGHLDSETCENDEKGKQKLGKRNSLKQAK
KRRIVISSDSECDDLDFGNGDSSSTSKKFKSSAKGDKSVGKINPKNGDKMCSPVGNGMTP
STSLTNSASTSVLIDSDSDNEDFVM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatataagcaggaactaaaacttgtgaaagaagagttagaaactgtagaggta
cagctagaagatattcttcaacgtcaaagtgacttattaacaaggagagatgaacttgaa
gccattttgaaacagaatgaatcaaagtctgaggtacacaacaaggattgggagaaaaaa
gattttcagtggtcagaaaggcttcaagacgagatgaaatcagtgtttggtttggacaat
ttgagacccatgcagttacaaacaatgaatgttacaatgtctgggaaagactgtatactc
ataatgcccactggtggtgggaaaagtctgtgtttccagctgccagctcttctctctaaa
ggtatcacattggttgtctcccctttagtctctttaatggaagaccaggtaatggctcta
caaggctataaggttgatgctaccatgttaaatgccagctctgataaggaaactataaaa
agagtccaggaggccatgatcgatcacaatgccactctgaaactactgtatgttacacca
gagaaattgtcaaaaagtaagagatttatggctcgtctagagaagatgtacaaggtggga
aggtttgctaggctggtgattgatgaggtacattgctgttcacagtggggacatgacttt
agaccagattataaatttttcggggatccgaagcgggagtttcccgatgttccaattcct
tggcctttacaaaccaaatttccctacttcgtgcttgaggagtttttaaaaaaattctaa
aaaatttaaaattttttgctgttcagggccccattcaacagaccaaaaattttctatttt
taggtacgagagaagccatctgttcagaaggaagtgatggatgatatacagaaactgatc
aatacaaagttcaataaccaatcgggcatcatatataccttctcaaagaaagagtcagaa
gatgttacatcagatctacaatcacgaggtataaaagctggttgttaccatgccgacctt
agtcctaaatatagaagtacagtgcataaagcttggatagataataaaatacatgttgtc
gtagcaactgtagcatttggtatgggaatagataaacccgatgtaagatttgttatacat
cattccctcagtaagtcaatggagaatctataccaggagagtggacgagcaggacgtgac
gagaagaaatctcactgtattgtttactaccgtcttcaggacgtgttcagacaaagtgct
atggtgatggcggaacaaaccggactcaataatctctatggaatcatgtcttactgtaca
gatcttagcaaatgtaggagaagcatgatagcaagatattttggcgaggtttgggaggca
agtcagtgtaagaagatgtgtgaccattgtaattctgactaccctgttgagaagaaagat
ttgacagcattttgtgtaaatgttctcaagatactggacaatgctggatcatctgaaaat
aaattaacagcaataaaacttctagatgcgtggcaaggaaaaggtccatctgtaaacaga
atcaagggaactgagacagggacagaccgcgagaagttggagcgtatcctggccttcatg
ttgaacaaacaatatatcagagaggactttcactttacaccttactccacaatcagctat
cttgttccaggtcctaacgcaggcttgatcagaaatcggacacagaaagtttttatagat
atgagaggaagaagaatctctgatagtggatctccgtcactttcaaaggtcaaaggtcac
caatatagtgagtcttcaagttcaaaggtcaaggacagtataccaaaactggtgattgta
aacagagaaaattcagtgttcacaaaacaaaaacacggacatttggatagtgaaacttgt
gaaaatgatgaaaagggtaaacaaaaattgggaaaaagaaatagtttgaaacaagcgaaa
aagaggagaattgtgataagcagtgatagtgagtgtgatgaccttgactttggcaatgga
gatagtagttcaacttcaaagaagttcaaatcatcagcaaagggagataaatctgtgggg
aaaataaatcctaaaaatggagacaaaatgtgttcaccagtaggtaatggtatgacccca
tcaactagtttaacaaactctgctagtacatcagttttgatagactcagatagtgataat
gaagattttgttatgtaa
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