Ruditapes philippinarum (Manila clam): 132728846
Help
Entry
132728846 CDS
T09557
Name
(RefSeq) chitin synthase chs-2-like
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00520
Amino sugar and nucleotide sugar metabolism
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
132728846
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132728846
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
132728846
Glycosyltransferases [BR:
rphi01003
]
Polysaccharide
Structural polysaccharide
132728846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chitin_synth_2
ChitinSynthase_IV_N
Glyco_trans_2_3
Glyco_tranf_2_3
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
132728846
NCBI-ProteinID:
XP_060570512
LinkDB
All DBs
Position
Unknown
AA seq
1515 aa
AA seq
DB search
MASEKEEKSAREKNKHADWRVKVWDRFKETEGDKLPPDGHVFWNKVYLATKLFFSGFLFM
VVLCSAVVSKGVLLILTWNIFTPADETSSGLKTFDKLFHYNITVNQTTTGNDFITNIYFI
WALFVMVVTPNVFTVMFCVWRIIFRKSGTLRFKTLLVALLPATLHSVGLSFLVFYVLPSL
DPISGLWYSCSVSFIPSIVKLHFGAKKLRKHKDSNENESRFAWSFLVRIMAFLLSVVSLA
FWGVYISQASTSAVRVAQIVLSVLSPILVSVIWMDNFLPSLQKEQEVGNGQKKNHVKKVM
NANNNNELTGNERNDNDDSEKQISYPNWIYEYKHTIFRSSFKMHAVINTWKICITFVMVI
AIHGSPCDNCLEALFGSLNQPAKQMSPIIDDNWLLNVDLCETATPFIVAVVGISTSLVCQ
RLSVAAIKVLAQIQGFSAPVCFVTPVTFVLIVTVSSQLNNGDYICQFPFPWFDGNKPISN
LAYMIIASLTGYLGLILTAGHIWTIETERMSKENMIFYAPSFCGVLLEQSLMLNKCKESN
FQTTPVSKTNDTTDNVSQSNPGGTTDVDSNRKEGNKTNKLLEGFPMIYFCATMWHETEVE
MVQLLKSLYRMDFDQCVQGIRKQKQDYYNFEVHIFFDDAFVEGNQMIANHYVHTFIKALY
RTFKSLYQNKIKPIKSPRRRITPYGGRLIWTLPGENRLIAHLKDKYKIRRKKRWSQVMYM
YYFLSHKLSDVEQDQDKQLEIARNTFIFALDGDVDFRPEAVTLLIDRMKRNEQTGAACGR
IHPIGDGPMVWYQKFEYAISHWLVKATEHVTGCVLCSPGCFSLFRGSALMDENVMKRYTT
MPTEARHHIQYDQGEDRWLCTLLLKQGKKVDYCAGSDAFTFAPEGFKEFYNQRRRWTPST
MANILDLLSDWRVITRNNDNVSIPYICLQLSWFVSSILTPGVLLLMIIGATNLAYPQLSL
HAALLINLLPVVLFVIVCFFAKTEHQLNVAAALSIIYTLVMMIVLVGLIREVVESGLCSV
ITWFLLIVSGIFVLSGLSHPKETKCLIHGFLFFIAIPSMSMLLMLYSVINMNNVSWGTRE
APKTKQGDGKEDNNNVRDIQSLVDIILSCSCCQPQVLQRDNKVDVGLEQRKSDLNKLEAG
TLHANDSKSEDNGEKHSDTATNTAPPATAPAEPYAEYLNFVPESSEKIKYLTLSEEDFWK
WLIETYLYPGEKTHCSAEEEEKRLKEQEKVKEELKELRNKASLAYLLINALFITVIYFLQ
QSNVDTGGGLSVRIECGNGDELVLEPISLAFTAVAGILLAIQFVCMLIHRSKTFLQINSI
TEIKQDEVDKYVKMFFYDAAKEVMNEKPEKEDIEPVAEEKKKPKDSLKQFIAKNVLEKLN
EARDLASASHKENIDMKVADGIKATSSTNKDSKNKFRKTVSSVIINMSQEKKQKLLENDS
FIQLEKCLLKAAERSGAVQPQNGAINVNGPNHDKFLDGKDDDEAKQRKMQIVVDVFQSSA
PSRANDSTISQQTTA
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagaaaaagaagagaagagtgctagggagaaaaacaagcatgcagattggcga
gtaaaggtgtgggacagatttaaagaaacagagggagacaaattaccacctgatggccat
gtcttctggaataaagtttaccttgctaccaaactttttttctccggctttcttttcatg
gtggtgctgtgttctgcagttgtgtcaaaaggagttttacttattttgacatggaatata
ttcacacctgcagatgaaacatcatctggtttgaagacgtttgacaaactttttcactac
aacataacagtgaaccaaaccactactggcaatgattttataacaaatatatatttcatt
tgggcgttgtttgttatggttgtgacaccaaacgttttcacagtgatgttctgtgtatgg
agaataatatttagaaaatcaggaactctacgttttaaaacacttttagtggctctttta
cctgcaacactccattcagttgggctcagcttcctcgtgttttacgtgcttccatccctt
gacccaatttctggattatggtacagttgtagcgtgtcgtttataccatcaattgtaaag
cttcattttggagccaagaagctgcgcaagcacaaagattcaaatgaaaatgagtcaagg
tttgcctggtctttcttagtaaggataatggcgtttttgttaagcgtagtgtcattggct
ttttggggtgtttacatatcacaagcatcaacgtcagcagtccgagtggctcaaattgtg
ttatcggtcttatcgcctattctggtgtcagtaatttggatggacaactttctaccgagt
ttgcaaaaagaacaagaagtaggaaacggtcaaaaaaaaaatcacgtgaaaaaggttatg
aatgcaaacaataacaatgaacttacaggtaatgaaagaaacgacaacgatgacagtgaa
aaacaaatctcatacccgaactggatttatgagtacaagcacacaatatttcgcagtagc
tttaaaatgcatgcagtcatcaacacatggaagatatgtattacctttgtgatggttatt
gcaatacacgggtcgccatgtgacaactgtttggaagccttattcgggagtttaaaccaa
cctgcaaaacaaatgtctccgattatagacgataactggttgttgaacgtggacctctgc
gaaactgctacaccatttattgtcgcggttgttggtatatcaactagcctcgtttgccaa
agactaagtgtcgcagcaataaaagttctagctcagattcaaggcttctcagcgcctgtt
tgttttgtgacacctgttacatttgttttgatagtgacagtttcttctcagctgaacaat
ggagactatatatgccaatttccatttccgtggtttgatgggaacaagccaatcagcaat
ctcgcatatatgataattgcttcactcacaggatacttgggtctcatacttacagcgggc
catatatggacaatagaaacggaaaggatgagtaaagaaaacatgatattttatgcacct
tcattttgtggagtacttttggagcagtcgttaatgctaaataaatgcaaggagagcaac
tttcagacaacacctgtttcaaagacaaacgatacgactgataatgtctcccaatcaaac
cctggaggaacgaccgacgtagattctaataggaaagaaggcaataaaacaaataaatta
ctagaaggttttccaatgatatatttttgcgctactatgtggcatgaaacggaagttgag
atggtacagctattaaagtctctgtacaggatggattttgatcaatgtgtacagggaatt
cgcaagcaaaaacaagattactacaactttgaagtacatattttcttcgatgacgcattt
gttgaagggaatcagatgattgcaaaccattacgtacatacatttattaaagccttgtac
cgtactttcaagagtttgtatcaaaacaagatcaaacctattaagtctcctcgacggaga
attacaccttacgggggtcgtctcatatggacgttacctggtgaaaatcgactaattgcg
catctgaaggataagtacaaaatcagaagaaagaagcgatggagccaggtgatgtatatg
tactatttcctttcacataaactaagtgatgttgaacaagaccaagataaacaattagag
atagcgaggaacactttcatattcgctctggacggtgatgttgacttcagaccagaagct
gtcacactgttgattgatagaatgaaaaggaatgagcagacgggcgcagcttgcggacgg
atacatccaataggagatggacctatggtatggtatcagaagtttgagtatgcaattagc
cattggttggtcaaggctacagaacacgtgactggttgcgttctttgcagccctggttgc
tttagtttattcagagggtcagcattgatggatgaaaacgtaatgaaaagatacaccacc
atgccaaccgaagctcgccatcatatacaatatgatcaaggcgaagacagatggctatgt
acgcttctgctgaagcaaggcaaaaaggtcgactattgtgctggatcggatgctttcacg
tttgcacctgagggtttcaaagaattttataaccagcggcgacgttggacaccttctacg
atggcaaatattttagatttgttgtcggactggagagtaataacgagaaacaacgacaac
gtctctataccgtacatttgtctgcagttgtcctggtttgtgtcgtcaatattgacccct
ggcgttcttctactgatgataatcggggcgacgaatcttgcctatcctcagttatcactg
catgccgccttgctgattaacttactacctgttgttttgtttgtaattgtttgcttcttt
gccaaaactgaacaccagctcaatgtagcagccgcactgtccattatttacacacttgtt
atgatgatagttcttgttggtttgataagagaggttgtcgaaagtggattgtgttcagtc
ataacctggtttctccttattgtgtctggtatatttgtactgtcaggattatctcaccca
aaggaaacaaaatgtctcatccatggctttttatttttcattgccattccgtctatgtca
atgcttcttatgttgtattcggtcattaatatgaacaacgtttcttggggaacccgcgag
gctcctaaaacaaagcaaggtgatggaaaggaagacaacaataatgtgagggatattcaa
agtttggtggatataattttaagctgcagctgctgtcaaccgcaagtgttgcaaagggat
aataaagtagatgtcgggttagaacagagaaagagcgatttaaacaagttagaggctgga
acactgcatgcaaatgatagcaaatcagaagataatggagaaaaacattctgatacagcg
acaaatacagctccgcctgctacggcaccagctgaaccatatgctgaatatctgaatttt
gttccggaatcgtcagagaaaatcaagtatcttactttaagcgaggaagacttttggaag
tggcttattgaaacatatctgtatcctggtgaaaaaactcattgcagtgctgaagaggag
gaaaaacgtttgaaggaacaggaaaaggttaaagaagaattaaaggaattaaggaacaaa
gcaagtttagcgtacctcctgatcaacgcactttttatcacagttatatatttcctgcaa
caatcaaacgtggacacagggggagggttatcagtgcgcattgaatgtgggaacggggat
gagttggtgcttgaaccgataagtttggcattcactgctgtggctgggattctcttagca
attcagtttgtgtgtatgttaatacataggtcaaaaacgtttttgcaaattaattcgata
acagagataaagcaagatgaagtggataaatatgttaaaatgtttttctacgatgccgca
aaagaagtgatgaatgagaagccagagaaagaagacattgaacctgtcgcggaagaaaaa
aagaaaccgaaagattctctgaaacaatttatagcgaaaaatgtcttagagaagctgaac
gaagcacgtgatttagcatccgcttctcataaggaaaacatagacatgaaagttgctgat
ggtatcaaagctacttcaagcactaacaaagattcaaagaataaatttaggaagacagtg
tcatcagttatcattaatatgagccaagaaaagaaacaaaagttattagaaaatgatagc
ttcatacaattggaaaagtgccttttaaaggcagcagaaagaagtggagctgtgcaacca
caaaatggtgcaatcaatgttaatggaccaaaccatgacaaatttttggatggtaaagac
gacgatgaagcaaaacaaagaaaaatgcaaatagttgtcgacgtttttcagtcctcagct
cctagtagagccaacgattcgacaataagtcagcagactacagcctga
DBGET
integrated database retrieval system