Ruditapes philippinarum (Manila clam): 132728854
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Entry
132728854 CDS
T09557
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132728854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132728854
04147 Exosome [BR:
rphi04147
]
132728854
04090 CD molecules [BR:
rphi04090
]
132728854
Enzymes [BR:
rphi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132728854
Transporters [BR:
rphi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132728854
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132728854
CD molecules [BR:
rphi04090
]
Proteins
132728854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA
RsgA_GTPase
Rad17
AAA_29
AAA_30
AAA_5
AAA_24
AAA_21
AAA_7
AAA_28
AAA_15
DUF815
SbcC_Walker_B
AAA_18
Motif
Other DBs
NCBI-GeneID:
132728854
NCBI-ProteinID:
XP_060570520
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MDEADERQPLISKDASLAINKASYTQSGSEKGDTNTAEEKKDDRKTASLRKLFRTADRLD
IFLMFMGGLAAVVHGAGWSILILFFGDITDLFITVNTSVAALNSTEGRYDEFNTQMTKYS
LYYVYIGVAVFVASYIQVCSWTVTCERQVHRIQKQFFRAILRQEIAWFDAHQSGELTTRL
ACDLDRVREGLADKFSYAIQFTAQFSFCFAIGFWKGWKLSFVIMSLSPLLAIGAAFKSKL
IANFSKREQETYAQGGGVAEEVLSCIKTVASFNGQNQDLKRYEEKLEYCKNLGIKKSYIT
GTGQGFPMLVMFSAYALAFWYGTEQVKSGDMTGGTVITVFFCVLIGTFSIGNITPHLTAI
VGAKGAAAVLIDIIDNDPEIDASSRDGEDLQDIHGNIEFKDVDFTYPTRKDVSVLKSFNM
NVRSGETVALVGPSGCGKSTAVNLVQRFYDPDKGSVSIDGRDIRGLNLKSLRNKIGVVSQ
EPILFGISIKENILLGQPNARYEEVERAAKESNCHDFIMALPQGYDTLVGERGAQLSGGQ
KQRVAIARALIRDPRILLLDEATSALDTQSERVVQDALDKARQGRTTIVIAHRLSTIQNA
DVINVVQDGVIVESGKHSDLMQKHGVYHQLVTVQMLIEEDEDMNEDDNAYGVDLVLNGIP
RKMTISENKQLKKSTSRQISKLISKPSATDDEKDIEEEVETAPGAKFCPMLQENKPELPF
ILIGCMAAAVNGCTMPAFAIFFSEIIKVFMNNYSDSFLWSMMFLALGGVQFIVNFLQSVC
FGHSGERLTFRLRLKTFRAFMRQDMSYFDDPKHSTGALTTRLATDASQVKNATGIRIATM
IQSLFGLVAALVIAFIYGWKLAFVVLAGVPLMALAGALQYRFVMGNHKKDNVDLEAAGET
ASEAIENIRTVQSLTREPDFFQKYATSLNKPYRTNIKAAQLTGLTLGFSQGIVFMIYAGA
FRFGAYMVTTGDMTPDNVFKVFFAISMTGIVIGQSSSFLPDYSKAATAGGLIFKTLDTIP
LIDVFSKRGQYLSNISGRVQIRNVTFNYPMRPDVPVLKGINIDVEPGQTVALVGPSGCGK
STVVSLLQRFYDPQDGSISIDGINIKDINLIRLRHLISVVSQEPVLFDCSIKDNITYGLD
SSIGMDEVIASARAANIHDFISNLPSGYDTVVGEKGTQLSGGQKQRVAIARALVRNPKIL
LLDEATSALDTESEQVVQAALDNAQEGRTCIVIAHRLSTIQNADVIYVIDAGKVVESGNH
QHLLNKKGVYATLVSGQQLSK
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcagacgaaagacaaccgcttatatcaaaagatgcgagtcttgcgattaat
aaggcgtcatacactcaatcaggcagtgaaaagggagatacaaacacagcagaggagaag
aaggatgatagaaagacagcgtctcttagaaaactgttcagaacagccgatcgtttggac
attttcctcatgtttatgggaggtttggcagctgttgtccacggtgcaggctggtcaata
ttgattctattcttcggtgatataaccgatctatttataacagtgaacacttcagttgcg
gccttgaactcaactgagggacgttatgatgagtttaatacacagatgaccaaatactcg
ttgtattacgtatatatcggagtagcagtcttcgtagcgtcttacatacaggtatgctca
tggacagtgacttgtgaaaggcaagttcatcggatacaaaagcagttttttcgcgccatt
ttgcgacaagaaattgcttggtttgatgcacatcaaagcggggaacttacaacaagattg
gcttgtgaccttgacagggttcgggaaggtcttgccgacaagtttagctatgcaattcag
tttacagcccagttttccttttgctttgctattgggttttggaaaggctggaaactgtcg
tttgtaataatgtcattatcacccttacttgcaataggggcagcattcaagtcaaagctg
atagctaacttctctaagcgagaacaagagacttatgctcaagggggcggtgtagcagaa
gaagttttgtcttgtataaagactgtagcgtccttcaatggccagaaccaagatttaaaa
cgatatgaggagaaacttgagtattgtaaaaatctgggtatcaagaaatcttatatcaca
ggaactggtcagggattcccaatgctcgtcatgttctcagcatacgcccttgctttctgg
tatggcaccgagcaagtgaagtccggcgatatgacaggcgggacggttataacggtgttt
ttctgtgtgctgataggcacgttttccattggcaatataactcctcatctaacagcaatc
gttggggcgaaaggtgccgccgccgtgcttatagatataattgacaacgatccggaaatt
gacgcaagctcacgtgacggggaagacctgcaggacatacacggaaatatagaatttaaa
gatgtcgactttacctacccgaccagaaaagatgtttcggtcctgaaaagttttaacatg
aatgtaagatctggtgagacagttgctttagttggaccaagcggttgtggcaagtcaaca
gctgttaatcttgtacaacgattctatgatcctgacaaagggagtgtttcaattgatggt
cgggacatccgaggattgaacttaaaaagtctacgtaacaaaattggcgttgtctcccag
gagcctatcctgtttggcatatcaattaaagagaacatactgctagggcaacccaatgcc
agatacgaggaagttgagcgggcggcgaaagagtccaactgtcatgatttcataatggcg
ttacctcaaggctatgacactttggtcggagaaagaggtgcccagctttcaggaggccag
aagcagagagttgcaattgctagagcgctcatcagagacccgagaattttacttctagac
gaagcgacatcagcacttgacacacaaagcgaaagagtcgtgcaagatgcattagataag
gcgagacaaggacgcacaaccattgtgattgcacatcgattatcaacaatacaaaatgct
gacgtcattaacgttgtacaagatggcgtcattgttgagtcaggaaaacattcggatctc
atgcaaaaacatggtgtttatcatcagttggtgacggtacagatgctgattgaagaagat
gaagatatgaacgaagatgataacgcctatggtgtagacttggtactaaatggtatccca
agaaagatgaccatatcagagaataagcagcttaaaaagtctacatcaagacagatttct
aagctgatttcaaagcccagtgcaaccgatgatgaaaaggacatagaagaagaggttgag
actgccccaggagctaaattctgtcctatgctacaagaaaataaaccagaattaccgttt
attttgattggatgtatggcagccgctgtcaatggatgtactatgccggcatttgctata
ttctttagtgaaattatcaaagtatttatgaacaactactcggacagttttttgtggagc
atgatgttcctagcacttggtggagttcagtttatagttaatttcctacagtcggtttgt
ttcggtcactccggagaaagattaacatttcgtctacgtttgaagactttccgtgcattt
atgagacaggatatgtcgtattttgatgaccctaaacattccacaggagctttgactaca
agattggcaacagatgcatcacaagttaaaaatgcaacaggtatccgtatagcaacaatg
atacagtctctgtttggtcttgtcgctgcattggttatagcttttatctatggatggaaa
cttgcatttgtggtccttgctggcgttccgttaatggctttggcaggtgctttacagtat
agatttgtaatgggaaaccacaagaaagataacgttgatcttgaagcagcaggggagaca
gcaagtgaggccatagaaaatataaggactgtgcagtcattgacaagagaaccggatttc
ttccagaaatatgctacttctttgaataagccatacaggaccaatatcaaagcggcgcag
cttactggattaactcttggtttttcacaaggcattgtgttcatgatatatgccggagca
ttccgatttggtgcttacatggtgacaacaggggacatgactcctgacaatgtgtttaaa
gtgttctttgccatttctatgactggtattgtgattggacaaagtagctcttttctgcca
gattacagtaaagcggccactgcaggtggtctcatatttaaaactttagatactattcca
ctcatcgatgttttctcaaaacgaggccaatacttatctaacatatctggacgtgtacaa
ataagaaacgtaacctttaattacccaatgcgaccagacgtgccagtgttaaaaggtatt
aatatagacgtagaaccagggcaaactgtggcactagtaggtccgagtggatgtggcaaa
tccacggttgtgtctcttctacaacgattttatgatccgcaagatgggagcataagtatt
gatggtataaacataaaagatatcaatctcattagattgagacatcttatcagcgtggta
agtcaggagccagtcttatttgattgtagtattaaagacaatattacatacggtcttgac
agttcaataggtatggatgaagtcatcgcatcagcacgtgcagcaaacatacatgacttt
atatctaatttaccatcggggtatgacacagtagtaggagagaaaggcacacagttgtca
ggaggacaaaaacaacgagtagcaattgcaagagctttagtgagaaatccgaaaatactt
cttctggatgaggccaccagtgcattagatactgaaagtgaacaggttgtacaagcggcg
ttggacaatgcacaagaagggagaacgtgtatagtaattgcccatagactatcgactata
caaaatgcggatgttatatatgttatagacgctggtaaagttgtcgagtccggcaaccat
caacatttattgaacaaaaaaggagtgtacgccacattggtgtcagggcaacagttgtca
aaataa
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integrated database retrieval system
