Ruditapes philippinarum (Manila clam): 132729113
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Entry
132729113 CDS
T09557
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132729113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132729113
Transporters [BR:
rphi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132729113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
Zeta_toxin
AAA_22
AAA_15
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
132729113
NCBI-ProteinID:
XP_060570836
LinkDB
All DBs
Position
Unknown
AA seq
1776 aa
AA seq
DB search
MSSAGGQFLLLLWKNFKLQGRKKVVTVFEILVPVFFALLLLLIRNLADSEYIDNDTKWDS
AYPELGGNITGKTVIFYTPNTTFTDEVIQSIIDSGKTAATNKTGFASEQALLDDWNTNDN
TELWAAVVFTSDVTTNPPDTLDYKLRVTLRKGQEDEDRWRTANTYQFFSTFGYRNNESTG
GEPYYYETGFLALQYFIDKAFIEKHSANSMANIEVGVKKMLYPPFLQDVLATVLQTNLPL
FLVLGFILNALQMSMNIAYEKEKKLKESMKMMGLKTSIYWLSWFVKNLIYLVLVCIFYTI
IFNIKSGEKGKILNYTHPTIFFVFLLLYVIATIAFCFMISTFFSKAFSAAFAGGILFFLT
YFPYFFLRDQYETMSQSEKMAACLLHNVGMAFGINTMLIYEGTGDGAQWNNFYAPGTIDD
NFSLLDAMVMLLVDTVLYMVIAWYVDNVNPGDAGVAQPLWFPFLATYWCGKNKPSYWCGS
KVEDSGYENNGDGSVNSEHFERDPQGSKVGISIRHLRKVFGGNRIKQCFKKGNSFKDKVA
VNDTNLNMFEGQITSLLGHNGAGKTTTISMLTGFLEPTSGTALIDGKDIRTDINSVRKYL
GLCPQHNILFDLLTVEEHLIFFAKLKGCPSKDVDSEVNEMIQVLGLEQKRSALSQTLSGG
QKRKLSVGIALIAGSKVVILDEPTSGMDPAARRQTWDILQRYRQGRTIILTTHFMDEADI
LGDRIAIMADGVVKCSGTSMFLKKLYGAGYHMVVVKGKTCDVDRLTKLVQSHIPTAFVES
QISAEVSYLLPFTESPKFEKLFTEIEAQMSNLGVNSFGVSATTMEEVFLKVGEGTGEDEA
EEPENIQNGGNTNPAYGSTTKLPRIAFEANSTKSEAPFDSKKLPPIGSPEKPQVVNDLKN
GATNGAYYNDGSVETIVAMEKKNYAGYNQGVHKNTGLSLAMQQFYGMFVKKFIQARRNLS
VAVAQLLLPVVFTVMALAVEKAIPNVGDEPALALNLGPFSDYTVAFSNGSTATATTESQA
SFYSGQFGGNTVKVDRSRYTEMDDYFKYVQDDIGTSTFNRRYIVAGDFEDSTPDTATAHY
NGQPYHSIAIALHYTMNGLLKQITGDSTKNIKVINHPLPKKINDNSRRLFFSTNGTGFTI
AISVLFGMAFMATSFIIFLIKERSVGAKHLQVVSGVGPFAYWSSTFVWDIINYTIPVLII
LVIFAAFQTDAYVSGNRLGIVFLIFMLYGWAVLPFVYLLHFLFMIPSRGMVVVSMINLCS
GLVFLLATYTLSIPQLGTQDIGKALEVVFIIFLPNYDLGLALMDMYTNAGYKDTCEGYNY
KTVCAYIKAFEPYRQDPCCFPDHCPSNFCFEFFDNFLAWEKPGIGRECLFMLLQGVVYFI
IVLLIEFGVFTRLSNMLRNRQPVAVGSQVDIRGQQEDGDVAEEKRRINDTPVDQLMKTDS
LILKNVNKIYRSGFQAVKGVSCGIPANECFGLLGQNGAGKTTTFKMMTGDESLTTGNAYL
NRFSVKGDIKQVQQNLGYCPQFDALIDQMTGTETLYMYARLRGISEDQIQQIVDQVIDIL
MLRKHADKQAGFYSGGNKRKLSTAIALIGDPPFIFLDEPTTGMDPGARRQLWNVLSDVRA
SGRTLVLTSHSMEECDALCTRIVIMVNGRFVCLGSPQHLKNKFGHGYTLFCRMGLNEAGF
VSGSQGLIDFLKLTFPDLEVFDDNQGYIHFRIPDDNAKLGQIFGVMERAKDQFCVDDYSV
HQTTLEQIFLAFTQNQVPPAESKKGCCSGGCLCFGR
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgctggagggcagtttttgctgctgctatggaaaaactttaaattacaaggt
cgtaaaaaggtggtgacagtgtttgagattctagtaccagtattctttgcccttttgttg
ttgttgattcgaaatttggctgattcagaatacattgacaatgacactaaatgggacagt
gcgtatccggagttgggaggaaatattacgggtaaaacggtgatcttctacacgccaaac
acaacatttactgatgaggttatccagagtataatagattccggaaaaacggcagccact
aataagaccgggtttgcctctgaacaagcccttcttgatgactggaacacaaatgataat
acggagctttgggctgctgttgtatttacgtccgatgtcaccacaaatccaccagataca
cttgattataaattgcgtgttactctgcgtaaaggccaagaagatgaagatcgttggagg
accgccaatacttaccaattcttctcgaccttcggttaccgtaacaatgaaagtacaggc
ggagaaccatactattacgagactgggttcctagctctacaatacttcatagacaaagct
ttcatcgagaaacacagtgcaaattcaatggctaacattgaagttggtgtgaaaaagatg
ctgtatccacctttcttacaagatgtcctggcaacggttctacaaacaaacttaccactc
ttcctggttctcggctttattcttaacgctcttcaaatgtcaatgaatattgcatatgaa
aaggaaaagaaactgaaggaatctatgaagatgatggggctgaaaacatctatatattgg
ttgtcatggtttgtgaagaatctcatttaccttgtattagtctgcatcttctatactatc
atcttcaatatcaagtctggtgaaaaaggaaaaattctcaactacacacatccgacgata
ttttttgttttcctgctactatatgtcattgcaaccatcgcattttgtttcatgatcagt
actttcttcagtaaagcattttcagcagcatttgctggaggtattctgtttttcctgacg
tattttccgtacttctttttacgtgaccagtatgagacgatgtcacaatcggagaaaatg
gccgcttgccttttacataatgttggcatggcatttggtataaacaccatgcttatatat
gaaggaacaggtgatggcgcacagtggaataacttttacgcccctggtaccattgatgat
aatttctctctgctggatgccatggtaatgttactggtagacacagtgttatacatggtg
attgcctggtatgtggacaacgtcaaccccggggatgcaggtgtcgctcagcctctctgg
tttccattcctggcaacttactggtgtggcaaaaacaagccatcatactggtgtggatca
aaagttgaagattcaggatatgaaaacaacggagatggttccgtgaacagtgaacatttt
gagcgggatccccaaggctctaaagttggcatcagcatacgtcatctaagaaaggttttt
ggaggaaatcgtataaaacaatgttttaagaaaggaaatagctttaaagacaaagtggcc
gtgaatgacaccaacttgaacatgtttgagggtcagataacatctttattaggacataac
ggagctggcaaaacaaccaccatatctatgctgacaggttttctggagcctacaagtgga
acagctttaattgatgggaaggacatacggacagacattaacagtgtgagaaaatacctt
gggttgtgtccacaacacaatattctgtttgacctgctgactgtggaagaacatcttatc
ttctttgccaagttaaagggttgcccaagcaaggatgttgatagtgaagtaaatgagatg
atacaagtgctgggccttgagcagaaacgatctgccctgtctcagacattgtctggtggt
cagaagcgtaaactgtcagttggaatagctctcattgctggatcaaaggttgttatcttg
gacgaaccaacatccggcatggacccagcagctagacgtcagacctgggatattctacaa
cggtaccgccagggtcgtactattatccttacgacacatttcatggatgaagctgatatt
ttaggcgacagaattgctatcatggctgatggggttgtcaagtgttctggaacttctatg
tttttaaagaaactttacggtgctggttatcacatggtagttgtgaaaggcaagacatgc
gatgttgaccgtcttacgaaactcgtgcagtcgcacatacccacagcatttgttgagagc
cagatcagtgcagaggtctcctacttgctaccattcactgaatcaccaaaatttgagaaa
cttttcactgaaatagaggcccagatgagtaaccttggagtaaatagctttggtgtgtct
gccactactatggaagaagtttttctaaaggttggcgagggaactggtgaagatgaggcg
gaggaaccggaaaatattcaaaatggtggaaatacaaacccagcctatggcagtacaacc
aaactaccaaggattgcttttgaagcaaattcgacaaaatctgaagcaccttttgactcg
aagaagctgccacctataggcagtccggagaagccccaggttgtcaatgatttaaagaat
ggagctaccaatggtgcttactacaatgacgggtctgttgaaactattgttgccatggag
aaaaagaactatgctggttataatcaaggtgtccacaaaaatacagggttgtccttagcc
atgcagcagttttatggtatgtttgtgaagaagttcattcaagcaagacgtaatttatca
gtagctgtggcccagcttcttcttcctgttgtctttactgtaatggcattagcggtagaa
aaagcaattccaaatgttggcgatgagccagcgttagcacttaacttgggtcctttttct
gactacactgtggcgttcagtaacggttcaacagcgacagcaaccacggagagtcaagca
tctttctatagcgggcagttcggtggaaatactgtgaaagtggatagatcgagatacacg
gaaatggatgattactttaaatatgttcaggatgatattggcacttcaacctttaataga
cgttacattgttgctggtgattttgaagatagtacacctgacactgccacagcacattac
aacggtcaaccataccatagcattgcgattgccttacactacaccatgaatggactcttg
aaacaaattacaggggattccacgaaaaacattaaagtcatcaatcatcctttgccgaag
aagattaacgataattcacgacgtttgttcttctccaccaacggaactggattcacaatt
gctatatctgttctgtttggaatggcttttatggctacaagttttatcatatttttgata
aaagaacgatccgtcggagcgaaacatctccaggtggttagtggcgtgggtccatttgct
tactggtcttcaacatttgtatgggacattatcaattatacgattcctgtgttgattata
ttggtcatctttgctgcgttccagacggatgcgtacgtttccggtaaccgactcgggata
gttttcttgatttttatgctgtatggttgggcagtgttaccttttgtgtacctgttgcac
ttcctgttcatgataccgtcacgtggaatggtcgtcgtctccatgatcaatctttgttct
ggtctggtatttttgctggcaacatacaccctcagtataccacagttgggcacacaggat
attggtaaagctttagaagtagtgtttattattttcctgccaaactacgacctaggactg
gccctaatggacatgtatacaaatgcagggtacaaggacacttgtgaaggatataactat
aaaacagtgtgtgcttatatcaaggcttttgaaccttaccgccaggatccatgttgcttt
ccagatcactgtccatcaaatttctgctttgaattctttgataatttcctggcctgggag
aaacctggcattggtcgggaatgcttgtttatgttattacaaggcgtggtatactttatt
attgttcttctaattgaatttggcgttttcacccggctctccaacatgcttagaaaccgg
caaccagttgctgtcgggtcacaggttgatattagaggtcagcaggaagatggtgacgtt
gctgaggaaaaacgtcgtattaacgatacgcctgttgatcagctaatgaagacagattca
ctcattttgaaaaatgtaaataaaatatatcgatcagggttccaggcagttaagggtgta
tcatgtggtattccagcaaatgaatgttttggtttgttaggacagaatggagcgggtaaa
acaaccacgtttaaaatgatgactggagatgaatctctaaccactggcaatgcatacctc
aatagattttcagtgaaaggagacatcaagcaggtacagcagaatcttggatattgtcca
cagtttgatgcattaattgatcagatgactggtacagagacgttgtatatgtatgctcgc
cttagaggtatatccgaggatcagattcaacaaatcgtggatcaagttatagacatcctc
atgttgcggaaacatgccgacaagcaagcaggcttctatagtggtggtaataagagaaaa
ttgagcacagccatcgctttgattggtgatccaccatttattttcctggacgagccaacc
accggaatggatcccggagcacgtagacagttgtggaacgttctgtcagatgtcagagct
agtggccgaacacttgtccttacttcacacagcatggaagaatgtgatgccttatgtacc
aggatagttatcatggtcaacggaagatttgtttgtctaggtagtccccagcacttaaaa
aacaagtttggtcatggttacacattgttttgccgcatgggtttgaatgaagcaggcttt
gtgtctggtagtcagggacttatagacttcttgaagctgacgttcccagacttggaggtc
tttgatgacaaccaagggtatatccatttccgtataccagatgataacgcaaaacttggt
caaatcttcggtgtgatggagagagcaaaagatcaattttgtgtagatgattactctgtg
caccaaacaacgcttgaacaaattttcctcgcgtttacacaaaaccaggttccaccggcc
gagtcgaagaagggttgttgttccggagggtgtctttgttttggtcgataa
DBGET
integrated database retrieval system
