Ruditapes philippinarum (Manila clam): 132729216
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Entry
132729216 CDS
T09557
Name
(RefSeq) sec1 family domain-containing protein 1-like
KO
K19998
sec1 family domain-containing protein 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132729216
Membrane trafficking [BR:
rphi04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
132729216
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
132729216
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
132729216
NCBI-ProteinID:
XP_060570916
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MATSLREKQITALKRMLNFNAPINKTTNVEPQWKVLVYDRFGQDIISPLLGVKELRDLGV
TLHLNLHSDRDTIPDVPAVYFVMPTDDNVQRICRDLENQLYESYYLNFISAIPRQKLEDL
ASTAISSGSVTQVSKVFDQYLNFISLEDDMFTLRHQDRDSISYYSINRGDVKDSEMEQIM
DTIVESLFSVFVTLGTVPIIRCPRGNAAEMVAEKLDKKLRENLRDARNSFFTSDSVQAGQ
FSFQRPLLVLLDRNLDIATMLHHTWTYQALSHDVLDFKLNRVEIEEASEVRSPGGTRPIK
KKKSYDMHNTDRFWQIQKGNPFPTVAEAVQEELDAYRAKEDEVKSLKAAMGIEGEDESAI
SMLSDNTAKLTSAVSSLPELLEKKRLIDMHTNIATALLDQIKSRKLDVYFETEEKLMSKA
MLDNLMEIISDPEAGTPEDKLRLFLIALICGPTLSDGQIDQYRDALVAANCDVSALQYIR
RWKAYTKMTAAPSQYGGGGTKTVNMFSKLMSQGSQFFMEGVKNLVIKRHNLPATRIVDAL
MELKTMQDIEDYRYFDPKLLRADSSIPRNKSPFQEAYVFVVGGGNYIEYQNLVDYAKGKS
ATSPKRVVYGCSDLSNASQFLKQLSHLGQEM
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcgttgagagaaaaacaaattactgctttaaagcgaatgttgaattttaac
gcccctataaacaaaacaactaatgttgaacctcagtggaaagttcttgtttatgatcgt
ttcggccaggacattatttcgcctcttcttggagtgaaagaactgcgtgacttgggagtg
acactacacctgaatttgcactctgatcgagacacgataccagatgttccagccgtgtac
tttgtcatgccaacagacgacaatgtccagagaatttgcagagatctcgaaaatcagttg
tatgagtcatactacctaaattttatttctgccatccccagacagaaattggaagacttg
gcaagtactgccatcagcagtggcagtgtcacacaagtttctaaagtgtttgaccaatat
ttgaactttatttcattagaagatgacatgtttacattgagacatcaggatagagacagt
atatcatactactcgatcaaccgcggagatgtaaaagattccgaaatggaacaaataatg
gacactatagtagagagtttgttttcagtatttgttacattaggaacagtaccaattata
cgatgccccagaggtaatgctgcagaaatggtagcagaaaagttggacaaaaagttaaga
gaaaatctgagagatgcccgcaatagtttctttacatctgatagtgttcaagctggacag
ttcagttttcaacgccctctcttagtgttgttggataggaatcttgacatagcaacaatg
cttcaccatacatggacatatcaggcacttagtcatgatgttctagactttaagttgaac
agagttgaaatagaagaagcctctgaagtaagatcacctggaggaacaaggccaattaaa
aagaaaaaatcatatgatatgcataatactgatagattttggcagatacaaaagggtaat
ccatttccaactgtagcagaagcagttcaagaagaacttgatgcttaccgtgcaaaggaa
gatgaagtgaaaagcttgaaagctgctatgggaatagagggagaggatgaatcagctatc
agtatgctgtctgataatacagcaaagttaacctctgctgttagctcattaccagaactc
ctggagaagaaacgtttgattgatatgcacactaatattgcaacagctcttctcgatcag
ataaaaagtcgtaaattggatgtttatttcgaaactgaagaaaagcttatgagtaaagct
atgcttgataacctaatggagattatatcagatcctgaagcagggacaccagaggataag
ctaaggttatttcttattgctctcatctgtgggcctactttgagcgatggacagattgat
cagtatagggatgctttagtagccgctaattgtgatgtgtcggctctgcaatatattaga
agatggaaagcttacaccaagatgactgcagctccgagtcaatatggtggaggaggtact
aaaactgtgaacatgttttcaaaattaatgtcacaggggtcacaattcttcatggaaggt
gtgaaaaatcttgtgattaaaagacataatctccctgcaactcgtattgtagatgcgtta
atggaattgaaaacaatgcaagacattgaagattatcgttactttgacccaaaacttcta
agagcagattcatctattccccgtaacaaatctccattccaggaagcatatgtgtttgta
gtaggtgggggtaattacattgagtaccagaatcttgtagactatgctaaaggaaaatca
gcaacatcgccaaaaagagttgtttatggctgtagtgacttgtcaaatgcatcacagttc
ctcaaacaattatctcatttaggtcaagaaatgtaa
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