Ruditapes philippinarum (Manila clam): 132729250
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Entry
132729250 CDS
T09557
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00020
Citrate cycle (TCA cycle)
rphi00640
Propanoate metabolism
rphi01100
Metabolic pathways
rphi01200
Carbon metabolism
Module
rphi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rphi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
132729250
00640 Propanoate metabolism
132729250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132729250
Enzymes [BR:
rphi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
132729250
6.2.1.5 succinate---CoA ligase (ADP-forming)
132729250
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132729250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
GARS_A
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
132729250
NCBI-ProteinID:
XP_060570955
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MASAVLRSSGRLCQNSVLKHAVKSLSVAQTTQQRRNLSLHEYLSWDLLKEAGVKVPKYRV
TESIGEVMRIAEDLVNETGNQDVVVKAQVLAGGRGKGTFSSGLKGGVKLAFSPDEAESLA
SKMIGHKLVTKQTGEAGRICNTVMVVERLYARREFYFAIAMERAFNGPVMIGSSQGGMNI
EEVAKENPTAIIKEPIDITTGVTREQAVSLAADMSFDASSIDQAADTFLNLYNNVFIKYD
ATMLEINPMAEDNGGNVYCMDCKLNFDDNAAYRQQDIYKLRDWTQEDPREQSAAKSDLNY
IGLDGSIGCLVNGAGLAMATMDIIKLHGGQPANFLDVGGGATSKQVTEAFRLITSDPNVN
SILVNIFGGIMRCDVIAQGIVQAGETLDLKIPIVVRLQGTRVEDAKAILAASPLRMFASD
DLDQAAKMAVKLAGIVTLAKEASVGVTFELPI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcagtgctccgttccagcggacgactgtgtcaaaactcagttttaaagcat
gcagtaaagtctttatcagttgcacaaaccactcaacaaaggagaaacctgtctctccat
gaatatctgtcatgggatcttctcaaagaagcgggagtgaaggtgcccaagtacagggtt
acagagagcattggagaagtcatgagaatagccgaggatttagtgaatgagacaggaaac
caagatgttgttgttaaagcacaagttttagcaggaggacgtggtaaaggcactttctcc
agtggtctcaaaggtggtgtcaaactagctttctcgcctgatgaagcagaaagtctggca
agtaaaatgattggacataaattagtaacaaaacagacaggcgaggctggtagaatatgt
aacactgtgatggttgtagagagattgtatgcccgaagagaattctatttcgctattgcc
atggagagagcttttaatggtccagttatgattggtagttcacaaggtggtatgaatatt
gaagaggtagctaaagagaaccctacagccataataaaggaacctatagatataactaca
ggtgtgactcgagaacaggctgttagtcttgcagctgacatgagttttgatgcttccagt
atagatcaggcagctgacacatttttgaacctgtataacaatgtgtttatcaagtatgat
gctaccatgttggaaatcaacccgatggcggaggataatggtggaaatgtatattgtatg
gattgcaagctaaattttgacgataatgctgcatatagacaacaagatatatataaatta
cgagactggacacaagaagatccaagagaacagagtgccgctaaatcagatcttaactat
attggtctagacggaagtataggctgtcttgtaaatggtgctggtttagctatggccaca
atggatattatcaaattacatggcggacagccagcaaactttctagatgttggaggcgga
gctacgtccaaacaggtgacagaggccttccgattgatcacatccgatcctaatgtgaac
tcaattttagtgaatatttttggaggtattatgagatgtgatgtgatagcacagggaatt
gtacaggctggggaaactcttgatcttaaaataccaattgtagtacgcttacaaggaaca
agggtagaagatgctaaggcaatattagctgccagtccacttagaatgtttgcttctgat
gatcttgatcaggcagctaaaatggctgtgaagttagcgggcattgtaactttagcaaag
gaggcttctgttggagtaacatttgaacttcccatctag
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