Ruditapes philippinarum (Manila clam): 132729809
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Entry
132729809 CDS
T09557
Name
(RefSeq) sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like
Organism
rphi
Ruditapes philippinarum (Manila clam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ephrin_rec_like
HYR
Sushi
TSP_1
EGF
TSP1_spondin
hEGF
TSP1_CFP_C
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
Fn3_ELFN
Laminin_G_2
Bact_surface_Ig-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
132729809
NCBI-ProteinID:
XP_060571616
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MQITMFVITLILMCFIINIERVETFENECEISGIKEHISNCVLNGNAVRPELLTSGRLPT
DTTCLTKSHAGFTRHRCNGTTWVNLQGGEERIVRSKRHTRGLFWDIFRNVEERVFGKVSG
GLKFDSDVREYCHRMHLDLTQKGSNFVSESRVKRTAEPLRIYAQASWPEPKVKDFRKRGI
KQIMRYGRPPNSYFPEDRTTVTYVAKNWHADIWFYRVRIDVTIVRCPSINKIENGYFQCH
PVTEFIRGARCKFGCYQGFQLKGTDHAECQVDGQWSPAKMPICEPLKCPDPPVVTGAGVP
SCTNGVSFRSICSYTCSTRGFDMPQGVSSALVCTNSRTWRKHGEPKCVDMEDPVFTYCPS
MVLVGTESGLNSAKVTWRLPEVTDNSGRAQTVIQTNKPPGSRFDAGIYNVKYSAKDDAGN
WVDAERRCFFNVQVKHISCHVLYPTPWVHFHCPTGYRSGSSCNVTCDPGKKLVGASSVRC
EKRNQTVLFGSWNWRNGTQTTCNSTNKCVPLVPPTNGAVVCDNWEGGKFCQVQCKKGTEM
SSVSLNTLYVCKSTDVWSEHPPDIKTCRVVQKRRKRHFIDAAIEYYYDGDCTNETTKQEI
ARNFIKALQSNDHYKDLCSTDCSASNVQITCGASKRRRRSQTNGTSEDITTRSIKLNIKL
PIETPADDDIDTIEEQCVELLNNVEIIVKEKEREIFNEIIVSQLKFSSNGLQTVCDEGSV
KSEESLNCIDCPEGTFYKKTIGGAVCRACAKATYQDEEAQTMCKPCPERTTTLNVGSTSP
DDCQDACDPGTFSQDGLLPCSPCAVGYYQSMYGQSKCVPCPVSMTTSSFAAVSVTECKNF
DITFIPEEGSQVNLTFQDSIALNDFTLDVWIQLNDVNEETSENENTTVTLVFLNENKEDI
LRIPFERTDMNYNFSDTSTELRVPVLDYRWHRVILRSHSCNIAVSVDNNTINIDSYSPTC
NKLRTKSISIVAGNGTKGSISQLNVWHGNQVFEEERKCFSREVGNALSWKKFEEADLIGA
YIKVPSQCDDFDNCADSPCLNGICRDILNGYECQCNKGFRGVQCEENIDDCVVNVCINNA
TCIDGIANYTCLCPVHFTGHLCEIEMVDGIWNEWSSWSECSTTCGPGTKKRKRLCNNPSP
DNGGKNCTGNDYDFTDCDNPNCTVCPQLEEPDNGTLKCENDTESINCTVSCDNGFDFDEE
PLELYYCGPDTFNEWNFQSGENSQRRLPKCVEIKVPKEMKLIYIAQYRDLYCENIEKLSD
IKEKIDNVVQAVVKTTTCIDSKSCEIKYDGVTNCYNKTHWKRSERQAGFGLQIIGRSENN
TDDFLADLEGAYDIIQQAADDGKFTVEAGKDIFELDLNSTSINGEVVCKPGQMRIDYYCV
PCGKGAYLDVNLCRPCPIGTYQDKIGQLECVKCPPDKLTIGIRSTSVDECNVQEQKADDA
DLTVVWTVVGVILGLVAVLVILALLYKVYKSRRGNLLFSKPGNFEMHVAEHVPENSNEES
SIPILLHKKDIHSSQEDKMDKKNVTEEEKEENEETPMIETQSGDATPD
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataacaatgtttgtaataactttaattttaatgtgctttatcataaatattgaa
agagtggaaacttttgagaatgaatgtgaaatctctggaataaaggaacatatttcaaat
tgcgtattaaatggaaatgctgtacgccctgagcttctgacatccgggagattaccgaca
gacaccacctgcctgacaaaatctcatgcgggcttcactcggcatagatgcaatggaact
acatgggtaaatttgcaaggtggggaagaaagaattgtccgctctaaacgacataccagg
ggactattttgggacatcttccgtaatgttgaagaaagggtgtttggaaaagtttcaggc
ggactaaaatttgacagtgatgtaagagagtattgtcacagaatgcatttggatttgacg
caaaaaggttcgaactttgtgagtgagtcacgtgttaaaagaacagccgaacctctccga
atatatgctcaagcaagttggcccgaaccgaaagtcaaagattttagaaaaagaggaata
aaacaaataatgagatatggtcgtccaccaaacagctatttcccagaagatagaaccact
gtgacctacgttgctaaaaactggcacgctgacatctggttttatagagtccgcattgac
gttacaatcgtccgttgtccttcaatcaataagattgaaaatggttactttcaatgtcac
cccgtgacagaatttatccgtggagctagatgtaaattcggatgttaccaaggatttcag
ctaaagggcactgatcatgcggaatgtcaagttgatggtcaatggagccctgctaagatg
cctatatgtgaacctcttaaatgccctgatcctccagttgtcaccggtgctggagtgcct
tcctgtactaacggtgttagtttccgcagtatatgctcgtacacgtgttctacacgtggt
tttgatatgcctcaaggtgtcagcagcgcacttgtttgcacaaactcacgcacatggaga
aagcatggtgaaccaaaatgcgttgatatggaagacccggtatttacatattgtccaagc
atggtattggtcggtacagaatccggattgaattcagcaaaggtgacatggagattgccg
gaagtaacggataatagtggacgtgcacagactgtaatacaaactaacaagccgcctgga
tcaaggttcgatgccggcatatacaacgtcaagtactctgcaaaggacgacgcaggaaac
tgggttgatgctgaaagaagatgtttcttcaatgtacaagtaaaacatatttcgtgtcac
gtgttatatccaacaccctgggttcattttcattgtccgactgggtaccggagcggctcg
tcgtgtaatgtgacatgtgatcccgggaagaagttggtaggtgctagcagtgtaagatgt
gaaaagaggaatcaaaccgtgctgttcggatcctggaactggcgaaacgggactcaaacc
acctgcaatagcacaaacaagtgtgttcctcttgtcccacccacaaacggtgccgtcgtc
tgcgacaactgggaaggcgggaaattctgtcaggtacagtgcaagaaaggaacggaaatg
tcaagcgtcagtctgaatacattatacgtgtgtaaatcaacagatgtctggtcagaacat
ccaccagatataaaaacatgcagggttgttcaaaagcgtcgtaagagacattttatagat
gcggcaatagaatactattacgatggcgattgtacaaatgaaactactaaacaagaaata
gctagaaacttcataaaagctctacaatcaaacgatcactacaaagatctttgctctacc
gattgcagcgcaagtaatgttcagattacatgtggtgcttcgaaaaggcgcagacgatct
caaactaatggcacaagtgaagacattacgactagatctatcaaattaaacatcaaactc
ccaatagaaactcctgcagatgatgatattgatacaattgaagaacaatgtgtagaactt
cttaataacgttgagatcattgtaaaagaaaaggaaagggaaatctttaatgaaataata
gtcagtcaactgaagttttcaagcaatggtttacagacagtgtgtgacgaaggatcagta
aaatcagaggaaagtcttaactgtatcgattgtccggaaggtacattctacaagaaaacg
ataggtggcgcagtatgtcgcgcatgcgcaaaagcaacataccaagatgaagaggcacag
acaatgtgcaagccgtgtccagaaaggacaacgacacttaatgttggtagcacatcacca
gatgattgccaagatgcttgtgatcctggtacattttctcaagatggacttttgccttgt
tctccttgtgcagtaggctactatcagtccatgtacggacaatccaagtgtgtgccatgc
cctgtctctatgacaacatcctcatttgctgctgtgtctgtaactgagtgtaaaaatttc
gacataacattcatacccgaggaagggtcgcaagttaatctaacatttcaagacagtatt
gcactaaatgactttactctggatgtttggatacaactaaatgacgttaatgaagaaaca
tctgagaatgaaaatacaactgtcacattagttttcttaaatgaaaataaagaggatatc
ttgagaataccatttgaacgaacagacatgaactataatttcagtgatacatcgacagaa
cttagagtaccagttcttgattacagatggcaccgtgtaatattgagaagccattcatgc
aacattgctgtttcagtagataacaatactataaatatagattcttatagccctacatgc
aacaagttgagaacaaagtcgatttcaatagtagcaggtaatggtaccaaaggaagtatt
tcacaacttaatgtttggcatggaaatcaagttttcgaagaggaacgtaaatgtttcagt
cgagaagttggaaatgctctgtcctggaaaaagtttgaagaggctgatctgattggtgct
tatattaaggttccaagccagtgtgacgatttcgacaactgtgccgattccccttgtttg
aatggtatttgtcgagatattctgaatgggtatgaatgtcaatgtaacaaaggttttaga
ggagttcaatgtgaagagaatatagatgattgtgtagtcaacgtttgtatcaataatgca
acatgtattgatggaatagccaactatacgtgcctttgtcctgttcatttcacgggccat
ctttgtgaaattgaaatggttgatggtatatggaatgaatggagtagttggtcagaatgt
tcaacaacatgtggacctggtacaaagaaacggaaaagactttgtaacaatccatcgcct
gataatggaggtaaaaactgtacagggaatgattacgatttcactgattgcgacaatccc
aattgcacagtatgtccacaactagaagagcccgacaacggtaccctgaaatgtgaaaat
gacactgaatctattaactgcactgtttcatgtgataacggattcgactttgacgaggaa
cctttagagttatattactgtggtccggacacattcaacgaatggaactttcagtcgggt
gaaaattcgcaaagacgcttacctaaatgcgtcgagataaaggtgcccaaagaaatgaaa
ttgatatatattgcacagtaccgtgatttgtattgtgaaaatattgaaaagttgtctgac
attaaagagaaaattgacaacgttgtacaggctgttgtgaagactacgacatgtattgat
agtaaatcatgtgaaatcaaatatgatggagtaaccaactgttataataaaacacattgg
aaacgctcagaacgacaggctggatttggtctacaaatcattggccgttcagaaaacaat
acagatgatttcctagcggacctcgagggtgcgtatgacattatccaacaagcagcagac
gacggcaagtttacagttgaggcgggaaaagatatctttgaattagatctgaattccact
agcatcaatggtgaagttgtgtgtaaacctgggcagatgagaatagactactattgtgta
ccgtgtggaaagggagcatatttggacgtcaatctgtgcagaccatgccctatagggaca
taccaggacaagataggacagctagagtgtgtcaagtgtcctcctgataaacttaccatt
ggtatacggtcaacttcagtggacgagtgtaacgtacaagaacagaaagctgatgatgct
gatctcacagttgtttggacagttgttggggttattttagggctggtcgctgtacttgtt
atccttgcacttctgtataaagtatacaagtcaaggcgcggtaaccttttgttctcaaaa
ccagggaactttgagatgcatgtggctgaacatgtaccagagaattctaatgaagaaagc
tcaattcctattctgctgcataagaaagacattcattcaagtcaagaagataaaatggac
aaaaagaatgttacagaagaagagaaagaagaaaacgaggaaactccgatgatagaaacg
caaagcggagacgcaactcctgattaa
DBGET
integrated database retrieval system
