Ruditapes philippinarum (Manila clam): 132729944
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Entry
132729944 CDS
T09557
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit-like
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132729944
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132729944
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132729944
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
132729944
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
132729944
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132729944
Prokaryotic type
132729944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
HTH_11
TrmB
MarR
MarR_2
DUF7346
F-93_WHD
Motif
Other DBs
NCBI-GeneID:
132729944
NCBI-ProteinID:
XP_060571763
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MADELAANVLKYLSENEPIDTQDLAKILCVDHQKIVGVVKSLQASGDVINAEQKLNKSYE
LTDEGKQVAENGSHEALIFNAIPDGGILQAELMKVVPNAKIGFSKAMQAGWVQMDKKAEG
GPKVFKKVESIEDTVQDCMKRIQDLKLDGITDNQKNEYKKRKLMQEVKLTSYLLSKGANF
TLSIAKQEVDLTPEMISKGTWKEKTFKEYNFDALGVMPDCGHLHPLLKVRAEYRQIFLEM
GFTEMPTNNFIESSFWNFDTLFQPQQHPARDAHDTFFISDPATAHSFPMDYLERVKKVHS
EGGYGSQGYKYDWSIDEAKKNILRTHTTAVTSRMLYKVAQQPEFKPVKYFSIDRVFRNEN
LDATHLAEFHQIEGVAADYGLTLGDLIGTINEFFRKLGIKKLRFKPAYNPYTEPSMEVFS
YHEGLKKWVEIGNSGIFRPEMLLPMGLPEGVNAIAWGLSLERPTMIKYGIDNIRELIGPK
VNLQMVYDNPLCRLDK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaactagctgccaacgtgctgaaatatttaagtgaaaatgagccgattgac
actcaagatcttgcaaaaatattatgtgttgatcatcaaaagatagttggtgttgtcaaa
agtcttcaagcttcgggagatgtaatcaatgctgaacagaagttaaacaaaagctatgag
ttgactgatgaaggcaaacaagtggcagaaaatggcagccatgaagccctcatattcaat
gcaattccagatggtggaattcttcaggcagaacttatgaaagtggtaccaaatgctaag
ataggtttcagtaaagcaatgcaggcaggctgggttcagatggataagaaagctgaaggt
ggaccaaaagtttttaaaaaggtagagagtatagaggatacagtacaagattgtatgaag
agaatacaggatctgaaattggatggtatcacagataaccagaaaaatgagtacaaaaag
agaaaattgatgcaagaagtgaaattgacaagttatctgttatctaaaggtgccaacttc
acattatctatagctaaacaagaggtagatctaaccccagagatgatttcaaagggaact
tggaaagaaaaaactttcaaggaatataattttgatgcgttaggagttatgcctgattgt
ggacatcttcacccactgctaaaagtacgagctgaatatagacagatctttttggaaatg
ggattcacagaaatgcccacaaataatttcatagagagcagtttctggaactttgacaca
cttttccagccacaacaacatcctgcaagagacgcacatgacactttctttatatcagat
cctgccacagcacatagtttccctatggattatctggagagagtgaagaaggtacattca
gagggaggatatggctcacagggatataagtatgactggtcaatagatgaagcaaagaag
aatattttaagaacccatacaacagctgttacatcaagaatgctctataaagtagcacaa
cagcctgagttcaaaccagtgaagtatttctctatagaccgagtgttccgtaatgagaat
ctggatgctacacatcttgctgagttccatcagatagagggagtcgctgcagattatggt
cttacacttggtgatctcatcggaactatcaatgaattcttcaggaaattaggtatcaaa
aagcttcgcttcaagccagcatacaacccttacacagaacctagcatggaagtgttcagt
tatcatgaaggtttaaagaaatgggtagagataggaaattcaggtatatttcgtcctgaa
atgttgctgcctatgggattacccgaaggtgttaatgccattgcatggggattatcatta
gaaagacctacaatgataaagtatgggatagacaatattcgagaattgattggtcctaaa
gtaaatctacaaatggtatatgataatccattatgtcgacttgacaagtga
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