Ruditapes philippinarum (Manila clam): 132729953
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Entry
132729953 CDS
T09557
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132729953
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rphi01007
]
132729953
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132729953
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132729953
Enzymes [BR:
rphi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
132729953
Amino acid related enzymes [BR:
rphi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
132729953
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
132729953
Prokaryotic type
Other AARSs
132729953
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132729953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
Arg_tRNA_synt_N
tRNA-synt_1e
DivIC
FlaC_arch
Cnn_1N
DUF6022
DUF6471
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
132729953
NCBI-ProteinID:
XP_060571776
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MADEVATLTARAIQAEAEIEALEAELSQLQDPQRLLANGIISPQLATLRAENAKLKYQVS
HLERNVQNEKRRSSDNMVSISQIVTDVFTLAIRQAFPDIEDAAILIQKGKFADYQCNSAM
NICQKLKSLGVKSSPQEVARKITNQIPEVAFFEKLEVAGPGFINVFLRKDYVAEQVNSVL
KNGVKPPRILAKKRVVIDFSSPNIAKQMHVGHLRSTIIGESVSRLLEWVGHDVLRLNHLG
DWGTQFGMLIAHLQDKFPDYIKQSPPIEDLQAFYKESKLRFDEDEAFKKRAYAAVVQLQK
YEANHMKAWNLICDVSRKEFQKVYERLGVKIIERGESFYQELMKDVVRELDDKGFTTVED
GRKLMFIEGQKVPLTLVKSDGGYTYDTSDMAAIKQRLQVEKGNWLIYVVDAGQGPHFDLI
YAAAQKAGFYNPKQTRVEHVAFGVVLGEDK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaagttgctacattgacagctagggctattcaggctgaggccgagatagaa
gctttagaggcagagctgtcacagttacaagaccctcagagactactggcaaatggcatt
atttcaccacaactagctacattgcgtgctgagaatgccaaactcaagtatcaagtttct
catttggagaggaatgttcaaaatgaaaaacgtcgcagttcagacaacatggtgagcatt
agtcagattgtgacagatgtcttcacccttgccattcgtcaagctttccctgatattgag
gatgctgccattctgatacagaaagggaaatttgctgattatcaatgcaatagtgctatg
aacatctgtcagaaactaaagtcgcttggtgttaaaagttcgccacaagaagttgcacgt
aaaattacgaatcagattccagaagttgcattttttgaaaagcttgaagttgctgggcct
gggtttatcaatgttttcttacggaaagactatgtagcagaacaggtcaacagcgtactg
aagaacggagtgaaaccacctagaatcctggccaagaaaagggttgtcattgacttttct
tcaccaaacattgcaaagcagatgcatgttggacatcttaggtcaacaataataggggaa
agtgtaagccgtttgctagagtgggtggggcatgatgttttacgtttaaatcatcttggt
gattggggtacccagtttggtatgttgattgctcacttgcaggacaagtttcctgattac
atcaaacagtctccaccaattgaagatctacaggctttttataaggagtcaaaattgcga
tttgatgaagatgaggcttttaaaaagagggcatatgctgcagttgtccagttacaaaaa
tacgaagcaaaccacatgaaggcttggaatcttatatgtgatgtgtcgaggaaagaattc
cagaaggtttatgaaagactaggagttaaaattatagaacgaggggagtcgttttaccag
gagttgatgaaagatgttgtacgtgagcttgatgacaaaggttttacaacggttgaggat
ggaaggaaattaatgtttattgagggtcagaaagttccactcactttagtaaagtctgat
ggtgggtatacatatgacacatctgatatggcagcaattaaacaaagactacaggttgag
aaaggcaactggcttatttatgttgtagatgctggacagggacctcattttgatctgata
tatgctgctgcccagaaggctggattctataatcctaaacagactcgagtagagcatgtt
gcttttggtgttgttcttggagaagacaagtaa
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