Ruditapes philippinarum (Manila clam): 132730074
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Entry
132730074 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1-like
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132730074
04121 Ubiquitin system [BR:
rphi04121
]
132730074
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132730074
Membrane trafficking [BR:
rphi04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
132730074
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132730074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_14
LRR_8
zf-C3HC4_3
SAM_1
LRR_4
SAM_2
zf-RING_2
MFMR_assoc
Motif
Other DBs
NCBI-GeneID:
132730074
NCBI-ProteinID:
XP_060571912
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGHNSSKPVNLKKSIRKSASNLSSQNANSSSEDEADGDLNLQQKSQKKKGSKKGKMPLFR
KQSTNAKKRQDHQQYLAKENPEPIFDLSNCEIEEIPSGVYALCKVLQKEVLLLHDNWLSS
IHSACNNITDLSSIRVLDVHNNELRHIPDEIGELKCLQVLNLERNRLTKLPKTIGHLSCV
QTLNIQGNKIKELPDSVCQMKSLRMLEIRENRITELPRQLCQVRTLETLNLDAISMKYPN
YTICCSGTEAIMKFLCSECDMEYLPPSNFLLNVLEPPKPELLSPQGSRALQQEEHFLKHI
TGYNDMLNQKRLELIEVERQFAEHQEEQAQLALMAQKNRDQMIAIIAQEESKMERELDKL
SKQKEINQKNLIDDLRKVEEGADNLISSLLDMNAKAKKTEELLDAIEEERIKENKLFEVR
WEESQNLRKKEVLKNMEMILHHSEWFEGVRKNFASDKENSLQMALENDEMMANAQIESVL
LNNDKQMTLLLEDLAKQEQLQRDAFEALLLQKDAKHQRITNQIALIQEELSNLTVVEVER
REFRAFEEMNRLAEKRIALIELLSQLMLEQDNRQIELRRRLEEMEQQKEDGQTDYWLVQY
QRLMDQKPQSLIDREQNLEISVVKILNKAKAEDYLPRFARHRITIETLVQMTEDDFKQMG
IHELGIRKDILRCVEAYKQEQNKLGEMDSMAGKATFVEPSRPPTAPPEDVVFTARQTSIV
ARGLNSECTICLDSISEVIFMNCGHVCTCLQCCESVKQCPLCRADIVRRVKLMTAQV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggacataacagcagcaagcctgttaatttgaagaaaagtatcagaaagtctgcatca
aatctgtcgtcccagaatgcaaattcatcctcggaggatgaggctgacggggatctgaat
ttgcagcaaaaatcacagaagaaaaaagggagtaagaaaggaaagatgcctttgtttaga
aaacaaagtacaaatgccaagaaacgtcaagaccatcagcaatatctggcaaaggagaat
ccagaacccatatttgatctgtctaattgtgagatagaggagattccatctggggtgtat
gctctgtgtaaggttctgcagaaagaggttttattactacacgacaattggttaagttcc
atccattcagcatgtaacaacataacagatctatcctctatcagggtactagatgtacat
aacaatgagctcagacatatacctgatgaaataggggaactaaaatgtttacaggtgtta
aaccttgagcgcaacaggctcacaaaacttcccaaaacaattggacatcttagttgtgta
caaacattaaatatccaaggtaacaagattaaagagttacctgacagtgtttgtcaaatg
aaatctctccgaatgcttgaaatccgagaaaaccggataaccgaattaccacggcaactg
tgtcaggtccgaacattagaaacgctcaatctggacgctattagtatgaaatatccgaat
tatactatttgctgttcaggtacagaagctatcatgaaatttctttgctcagaatgtgat
atggagtatttacctccttccaatttcctccttaatgtattggagccaccgaaacccgag
ttacttagtccgcagggaagtcgggcattacaacaagaggaacattttctgaaacacata
acaggttacaatgatatgttgaatcagaaacgtctggagctgatagaagtagagcgtcag
tttgctgagcaccaggaggagcaggcacagctcgcgctcatggcccagaaaaatcgtgac
cagatgatcgccatcatagcgcaggaagagagcaagatggagagggagctcgataaatta
tccaaacagaaagagattaaccagaaaaatctgatagatgatctgagaaaagtggaagaa
ggggcagataaccttatctctagtctactggatatgaatgctaaagccaagaaaactgaa
gagctgttagatgcaattgaagaagaaaggatcaaggagaacaaattgtttgaagtaaga
tgggaagaaagtcaaaacctcaggaaaaaagaagtgctcaagaatatggagatgatatta
catcattcagaatggtttgaaggtgtgagaaagaacttcgcatctgacaaggagaactct
ttacagatggccctagagaatgatgagatgatggccaatgctcagatagaaagtgttttg
ttaaataatgacaaacagatgacattacttctagaagatttagccaaacaggaacaactt
cagagggatgcttttgaagccctgttgttacagaaagatgcaaaacatcaaagaattacc
aatcagatagctttaatccaggaagagttgtctaacctgacagtagtggaggtggaaagg
agagagttcagggcctttgaggaaatgaatcgtctggcagagaaacgtatagctcttata
gagctgttgtcacaattgatgctagaacaagataatagacagattgagctcagacgtaga
ctggaagagatggaacagcagaaagaggatggtcaaacagattattggctggtacaatat
caaagacttatggatcaaaaaccacagtctctcattgatagggagcagaacctagagatt
agtgttgtgaagatattaaataaagccaaggctgaggattatttacctaggtttgctaga
catagaatcaccatagaaactctggtacagatgacagaagatgacttcaaacagatgggc
attcatgagctaggaatacgtaaagatatactcagatgtgtagaggcatataaacaagaa
cagaacaagcttggagaaatggatagtatggcgggtaaagctacgtttgttgaaccttca
agacctcccacagccccacctgaagatgttgtgttcactgccagacagacttctattgtt
gccaggggtcttaactctgaatgtacaatatgccttgatagtatttctgaagtgatattt
atgaactgtggacacgtgtgtacatgtctacaatgttgtgaatcagtcaagcaatgtcca
ctgtgtcgggcagatattgtacgaagagtgaagttaatgacagcacaggtgtaa
DBGET
integrated database retrieval system
