Ruditapes philippinarum (Manila clam): 132730083
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Entry
132730083 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132730083
KO
K26457
neuronal PAS domain-containing protein 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132730083
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132730083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
132730083
NCBI-ProteinID:
XP_060571923
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MAPGPIEELALLDLERSNKGASKQRRDQINGEIGTMRDLLPLPESARQRLSQLQIMSLSC
VYIRKCNILQKMLPTNRCSIEVPCEFSSALTGFILVTTRDGKLVYISENVTEYLGHSMVD
MKTQGDSLFDIVDKRDHGTVQAQLLHGVSAAEGHHNRKISFFCRMNMSRTLKRQGGFGDV
KVMHVKGHFVPVSQKEAGVPEQHVFMALCTPLITPDVKESLIQNNTTVFRSVHKLDMSFI
ELTETGEFHLGITNEQIENKSWYSMLHPEDLTEARAKHIQLIKSRHEMGCMMTVRMLTHT
NKVIWVNIVMHVRQALVSNSDDPVIVCINQVVSEEEAKQFKIQGQLFALYAARAPDIFFG
GHHFQHFQQIIDPDMLGRHQTHAFMQQPHAQQGYYSDQQRYQFGTRPSPNEYQQQPQQHQ
KYGMPGLDEMSQQPPHGHTSTIKALKRKLQENFISSCKPNKIPRVMSSESPDGGFQDFTS
GQTHYVMNVNVFRGSANDILGSGNGIPVYGGDSLPMIYQSAPIDHVQAIRQKKAMLVNAI
APVGTPAVVQKLAPTCTLEQVVPEVTIPDCYLTPDPSPANSPKPHSVVPVKQETQEIKQL
TSYVMGRLNELKENQTIFETPVAKPINGVPNKKKNLPVIDATFVDSFFDDLRPIEKEGCI
EIKMEPLSPEPTIQNAVGKQNAHSRIALQNGLIMTSQSPPPIVQPLPQRTCNVKEELTLE
ECTDLEELLGLVDTAGPETNMMSPAYSTESVSPVASPKSYTCSVSESSPVSRSFGSTPCL
KQNSLDQMYTEMSPGSSSPGYEGRDDILEPDSWLLEPISMSLDMSLADIETMPCEVKTRE
EEDLFHLKKLLQQSWEPCGTQGFKSHKNTQ
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaggtccaatagaagagctggctcttttagacttggaaaggtcgaacaaaggg
gcttcaaaacagcgtagagatcagatcaatggtgagataggaacaatgcgggacctgctc
ccgctgccggagtcggccagacaaaggctttcacaacttcagattatgtccctgagttgt
gtctacatacgcaaatgtaatatactacagaaaatgctcccgaccaatcgttgctcaatt
gaagtgccttgcgagttttcctcggcacttacggggttcatacttgtaacaacacgggat
ggaaaactggtatacatatcggaaaatgttacggaatacctcggccattctatggtggac
atgaaaacacagggtgacagcctttttgatatagtagataagagggaccatggcactgtg
caggcgcagttgttacatggtgtctccgcagcagaaggtcaccacaatagaaagatctca
ttcttctgtcgcatgaatatgtcacgaacattaaaaagacaaggtggcttcggcgacgtc
aaggtaatgcacgtgaagggtcatttcgtgccagtaagccagaaagaggctggcgttcct
gagcagcacgtgtttatggctctatgtaccccattgatcacaccagatgttaaagaaagc
ctcattcaaaacaacaccactgtcttcagaagtgttcacaaacttgacatgtcattcatt
gaacttaccgaaacgggagaatttcatctgggaataacaaacgagcagattgaaaacaaa
tcttggtactctatgcttcaccccgaggatctcacagaggcacgggctaaacacattcag
ttgataaaatctcgccatgagatgggatgtatgatgacagtgcgcatgctcacgcacaca
aacaaggttatctgggtcaacattgtgatgcatgttagacaggcgcttgtttcaaacagt
gacgatcctgttatcgtctgcattaatcaagttgtcagtgaggaggaagcgaagcaattc
aagatccagggccagttgtttgctttgtatgccgcaagagcaccagacatattctttggt
ggccaccatttccaacactttcagcaaattattgacccagacatgttaggacgccatcaa
acacatgccttcatgcaacagccacatgcacaacaagggtactattccgatcaacagaga
taccaatttggaactcgaccaagtccgaatgagtaccagcaacagccacagcaacatcaa
aagtatggcatgccaggtttagatgaaatgagtcagcagccaccacatggtcacacaagc
actatcaaagctctaaagaggaagctacaagaaaacttcatctcatcatgcaagccaaac
aaaataccaagggtgatgtcaagtgaaagtccagatggaggctttcaggatttcacgtct
ggccagactcattatgtgatgaatgtgaatgtattcaggggaagcgcaaatgatattctg
ggctctgggaacggaattcccgtctacggtggtgacagccttccgatgatataccagtct
gctccaattgaccacgtgcaagcaatcagacaaaagaaagccatgcttgtaaatgctatt
gctccggttggtactccagcagtcgtgcagaaattagctccgacatgtaccctagaacaa
gtagtcccagaggtcaccataccagactgttatcttactccagacccgtcgccggcaaat
tcaccaaagccacattcagttgttccagtaaaacaagaaacacaagaaattaagcagctg
acatcatacgttatgggcagactgaatgagctgaaagaaaaccagacgatttttgagacg
cctgttgccaagccgataaacggtgtaccgaacaagaaaaagaacctgcctgttatagat
gccacctttgttgattcattttttgatgatcttcgtccgattgagaaagaaggttgtatt
gaaattaagatggagccactttctccagaaccaactatacaaaatgcagtaggaaagcaa
aacgcacattctcgtattgcgttacaaaatggtctcattatgacgtcacaatcacctccc
ccaatcgttcagccattgccgcaacgcacatgcaacgtgaaggaggagcttactcttgaa
gaatgtaccgacctggaagagttactgggacttgttgataccgctggtccggaaaccaac
atgatgtcaccagcttactctaccgagtcggtctccccagttgcatctccaaagtcatat
acatgcagcgtgtctgagtcatcccctgtatcaagatcatttggttcaactccttgcctc
aaacagaactcactcgaccagatgtataccgagatgagtccagggtcttcgtcaccaggt
tatgaaggtcgagatgatatcttagaacccgatagctggctgctcgaaccaatcagcatg
tcgttagatatgtcgctggccgacatcgagaccatgccatgtgaggtgaagacacgtgag
gaggaggatctctttcatctgaaaaaactcctgcagcagtcatgggaaccatgtggtacc
caaggtttcaaatctcataaaaacacccagtag
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