Ruditapes philippinarum (Manila clam): 132730129
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Entry
132730129 CDS
T09557
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132730129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132730129
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132730129
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5714
DUF485
Motif
Other DBs
NCBI-GeneID:
132730129
NCBI-ProteinID:
XP_060571964
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MEMDDSNLRFFIISFLIVSVNIFQCSSSIPSYSKELETAVRTELFTDYEVLQRPDERTFV
SIGLNLVTINSLDIKDQILSTSGFFTMKWDDSRLDWSGNVNYTSIRFLFTTEKYAWRPAI
FIENSVTELEVFSNTNWLIRLSSDGSAYWTPGGIFETSCDVDITYYPLDTQTCSIVLTTW
AYTTNEVYLMFSDDPISTDDFSPNGEWDLIETSTSTETAEKSKHDTNSYTRLSFTFKLKR
RPLFHILNTIFPVLLMASLIIFVFKLPPESGERVGMSLTVLLAYAVYLTLIADNIPRTSL
STSILSTYLTIIFMLSTLSVIFTIVVLDIYFNHDDDEEPPRWVQTMTRLLLVKISMWKGE
RCCKKKKVSPKNKSSELSLSTVKLPLDGVEPFDSNAKTRYRGKNSDVVEVNHLEGDDDAD
EDEIKIYSWKEVALILDRCFMYLFILLVIVTSIVCLGILASK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatgattcgaatcttcgattcttcattatatctttcttgattgtatccgtc
aacatcttccaatgctccagttctattccgtcttattctaaagaattggaaacagctgtg
agaacagaacttttcaccgactatgaggtccttcagagaccagatgagcgcacgtttgtt
agcatcggattaaaccttgtgacaataaactctctggatattaaagaccagatattatcg
acgtcaggattttttacaatgaaatgggacgattcaagacttgattggtccggtaacgtc
aactacacaagtataagatttctttttactactgaaaaatatgcatggcgtccagcaatt
tttatcgagaatagtgtgacagaactcgaggtattcagcaacactaactggcttattcgg
cttagttcggacgggtcggcttactggacacctggtggtatatttgagacaagctgtgat
gtggatattacctactacccgcttgatacacaaacatgcagcattgtgcttacaacttgg
gcttacacaacaaacgaggtttatttgatgttttctgatgatcctatttccacagatgac
ttcagtccaaatggagaatgggatctgattgagacgtcaacaagtacagagacagcggag
aaatcgaaacatgacaccaacagttataccagactgtcgttcacatttaaactgaaaaga
cggcctttgtttcacattttgaatacaatatttccggttcttctgatggcgtcattgata
atatttgtttttaagcttcctcccgaatccggagaaagagtcggaatgtcactaacagtt
cttttggcatatgctgtctatttgacattgattgccgacaatatcccaagaacctcactg
agcaccagtatactgtctacatatctgacgattattttcatgttgagtacactgtccgtc
attttcaccattgttgtgctcgacatttattttaaccatgatgatgacgaagaacctcct
agatgggtccagacaatgacaaggttgctcctcgtaaaaatttcaatgtggaaaggagaa
agatgctgtaagaagaaaaaggtcagtccgaagaataaatccagtgaattaagtttgtct
accgttaaactgccgcttgacggtgttgaacctttcgattccaatgccaagacaaggtac
agaggtaaaaattcagatgtagttgaagtaaatcaccttgaaggcgatgacgatgcggat
gaagacgagattaaaatatactcatggaaagaggtggcccttattctcgacagatgtttt
atgtatttgttcatacttttagttattgttacaagtatcgtctgtctgggaatacttgcc
tcaaaataa
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