Ruditapes philippinarum (Manila clam): 132730238
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Entry
132730238 CDS
T09557
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132730238
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Others
EARP complex
132730238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EPO_TPO
Motif
Other DBs
NCBI-GeneID:
132730238
NCBI-ProteinID:
XP_060572098
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MSLTSKLKSFIKKQVTTNEDSHPSPIEENISHELFNGEPAVAKFKHEQYRSNPQEDQETI
DKIDKEYFEDVDPSLYELEKLPEVLNLEQVDDDRTRLRRQLQAVSKKVSEVVLQNHLAYA
AELQRVMELQKTLQLASIICKNGRGQLAEASTTFTRTSLHLLANVRKRQQLHALLKSLRT
IKTLQRTDMRLREMMEEEDYYGAIQLCLECQKAAITLKHYKCISELSSKLQDTLELIEEH
LDIALSKTCSLFDVAHYEKVQMAYTLLGKRQTAVDQLHLHFTSAIQNAAFQIVLGYVELC
SPSSDRQFNRLQYSDLCKHVTIESFTPCLRDLCKSLWGVMRSYYNTIRWHEEHDNLDTVQ
IDEDSSDTDSMNTVYIKQKLEHGLGRIWQDIQQKVRTYILGIDLSAFKLEEFIQFLDTVN
RMIDIGEDFCDSKSEHLQDSLKQQSLNYFKNHHRAKMDELRMFLENEGWELCPVKSSFHI
QHLVEFKFMKQTSPKKISANKNSNNKLADQSDSPIKRCKYFEEYSGNSSPFDIQTDTDYQ
EDVFAGVGDDNSGEEHSDSDSDVPDELKQDYIDELTGETHSRPGRRRYSRSRSYQKHVSI
VTNTSLNVFRVIGKYIQMMRLLKPIAFDVMTCMAQLFDFYMYSVFIFFGTELSSMDERQI
NNRLRSTLQRIHDSLIDDVHEVDNMEDPQHTEHRQEKIAAPHLSPIVDLNNPQKRFGLPE
RIVAAESLVFLGEQMEFLQPHLEAIIPQNKKAFLQQFYSQTVNMAAELRKPVYWTVSTNV
INYDIILQHMAAVKWDIKEIMSQHNSYVDVLIQQFSDFNSYMSELCRHMPVPRATYDQVW
DQILRLSARTFVEGYGNTKKCSIEGRALMQLDFQQYLKNVEKLIDLRPIPDREYVEGYIK
AYYFPENQLEAWLPEHREYSIKQLLVLVNAVDHLNRKARQRLVNMVEDMDKNSRR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttacaagtaaactaaaatcatttataaagaaacaggtcacaaccaacgaggac
agtcatccatccccaatagaagaaaatatcagtcatgaacttttcaatggtgaaccagca
gtagcaaagtttaagcatgaacagtatagatccaatccacaagaagatcaggaaactata
gataaaatagataaagaatactttgaggatgtagatcctagtttgtatgaactagagaaa
ttaccagaagttttaaatttagaacaagttgatgatgatcggactagattacgtcgccag
ttacaggcagtgtcaaagaaagtatcagaggttgtgttacagaatcacctagcatatgct
gcagaactacagagagttatggaattacagaaaacattacaacttgccagtatcatctgt
aaaaatggccgtgggcaactggctgaggcaagtacaacatttactcggaccagccttcat
ctactggccaatgttagaaaacgacaacaacttcatgctctactcaaatcattaagaaca
attaaaacattgcaaaggacagacatgagacttagggaaatgatggaggaggaagattat
tatggtgctatacaactatgtctggaatgtcagaaagcagccattactctcaaacattac
aaatgtatcagtgagttgagttccaagttgcaagacacattagaattgatagaggagcat
cttgatatagccttgtctaaaacctgttctttgtttgatgtggctcactatgagaaagta
cagatggcctataccctacttggtaaaagacagaccgcggtagaccagttacatctacat
tttaccagtgctatacaaaatgcagcgtttcagatagtgctaggatatgtggaattatgt
tcaccatctagtgacagacaatttaacaggctacaatactcagatctctgcaagcatgta
acaatagaaagtttcacaccatgtttgcgagatttatgtaagtcactatggggagtaatg
agaagttattataacactataagatggcatgaagaacatgataacctagatacagtacaa
atagatgaagactctagtgacacagattctatgaacacagtctatatcaaacagaagctt
gaacatggattaggtagaatatggcaggacatacaacaaaaagttagaacatatattctt
gggatagatttgtcagcatttaaactagaggaatttatacagttcttggatactgtcaac
agaatgatagatattggtgaagacttctgtgacagtaagtcagaacatttacaagattct
cttaaacaacagagtctgaactacttcaaaaatcatcacagggcaaagatggatgagtta
agaatgtttctagagaatgaaggctgggagctttgtcctgtaaaatcatcctttcatata
caacatcttgtggaattcaaatttatgaagcagacttcaccaaagaaaatttcagccaat
aagaatagcaataacaaactggctgaccaatcagattctccgataaaaagatgcaaatat
tttgaagaatactcagggaactcaagtccatttgatattcagactgacacagattatcaa
gaagatgtgttcgcaggagtaggggatgataacagtggagaggagcacagtgatagtgac
tctgatgttcctgatgaactcaaacaagattatatagatgaattaacaggagaaacacat
tccaggccaggcagaagaagatattctagaagtaggagttaccagaaacatgtttctatt
gtaaccaatacatcactgaatgtgttcagagttatagggaaatatatacagatgatgaga
ttattaaagcctatagcatttgatgtgatgacctgtatggctcaactatttgacttctat
atgtactctgttttcatattttttggaacagaactatcatctatggatgagcgtcagata
aacaatagattgaggtcgacgttacagaggatacatgacagtcttatagatgatgtacat
gaggtagataacatggaggatcctcaacatacagaacataggcaggagaagatagcagct
ccacatctgtcacccattgttgatttaaacaatccacagaagaggtttggtctccctgag
aggatagttgcagcagaatcattagtgtttcttggggaacaaatggagtttttacagcca
catcttgaagctatcattccacaaaataagaaagcattccttcaacaattttactcacag
acagtaaatatggcagctgagttgcgtaaaccagtctactggactgtgtcaactaatgtg
ataaactatgatataattttgcaacatatggcagcagtgaaatgggatattaaagaaatt
atgtcacagcataattcgtatgttgatgttttaattcaacaattttctgactttaactcg
tatatgagtgaattatgtcgacatatgccagtaccaagagctacctatgatcaggtttgg
gaccagatattacgtttgtcagcccgaacatttgtcgagggctatggtaatacaaagaaa
tgtagtatagaaggcagggccttgatgcaactcgacttccaacaatacctgaaaaatgta
gaaaaactaatagatcttaggcctataccagatagagagtatgttgagggctatatcaaa
gcctattacttcccagagaatcagctggaagcgtggttacctgaacatagggaatattct
atcaaacagttactagtgttagtgaatgctgtagatcatctgaacagaaaagcaagacaa
agacttgtgaacatggtggaagacatggataaaaatagcaggagatag
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